RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 GABPAQ06546 454 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 SUPT20HL1Q3ZLR7 823 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 METTL16Q86W50 562 aaKnown RBP17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 NACAP1Q9BZK3 213 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
SMARCD3-207ENST00000472103 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 HAND2P61296 217 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 PPARAQ07869 468 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 SHROOM1Q2M3G4 852 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 RBM8AQ9Y5S9 174 aaKnown RBP17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 TAF6LQ9Y6J9 622 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 LAMA4Q16363 1823 aa17.48■□□□□ 0.39
SMARCD3-207ENST00000472103 ZMYM6O95789 1325 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 TBC1D12O60347 775 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 EHD4Q9H223 541 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 GBA2Q9HCG7 927 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 ANGEL1Q9UNK9 670 aaKnown RBP17.47■□□□□ 0.39
SMARCD3-207ENST00000472103 ROBO3Q96MS0 1386 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 INPP5BP32019 993 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 SHMT1P34896 483 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 NF2P35240 595 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 JAG1P78504 1218 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 TBC1D10CQ8IV04 446 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 ZNF341Q9BYN7 854 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
SMARCD3-207ENST00000472103 CYP21A2P08686 494 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 CDK8P49336 464 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 TTLL12Q14166 644 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 C16orf86Q6ZW13 317 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 HERC5Q9UII4 1024 aaKnown RBP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 MYH8P13535 1937 aa17.45■□□□□ 0.38
SMARCD3-207ENST00000472103 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
SMARCD3-207ENST00000472103 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
SMARCD3-207ENST00000472103 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.44■□□□□ 0.38
SMARCD3-207ENST00000472103 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMARCD3-207ENST00000472103 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
SMARCD3-207ENST00000472103 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 PRDM1O75626 825 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 GDF11O95390 407 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 APLP1P51693 650 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 HTRA3P83110 453 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 TATDN1Q6P1N9 297 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 AMOTL1Q8IY63 956 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 WRNIP1Q96S55 665 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-207ENST00000472103 DOCK1Q14185 1865 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 TMEM88BA6NKF7 163 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 ZNF213O14771 459 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 SLC27A2O14975 620 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 RASA1P20936 1047 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 STOX1Q6ZVD7 989 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 NEDD4P46934 1319 aa17.42■□□□□ 0.38
SMARCD3-207ENST00000472103 FGRP09769 529 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 AKR1B1P15121 316 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 C1QTNF8P60827 252 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 MAP3K9P80192 1104 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 RASEFQ8IZ41 740 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
SMARCD3-207ENST00000472103 REC8O95072 547 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 CAP2P40123 477 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 HUNKP57058 714 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 FKBP1BP68106 108 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 VGLL4Q14135 290 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms