RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 COL9A3Q14050 684 aaPredicted RBP23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 SH3BP5LQ7L8J4 393 aa23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 ZFPM1Q8IX07 1006 aa23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 TRPM4Q8TD43 1214 aa23.01■■□□□ 1.27
CHMP2B-204ENST00000472024 SMIM22K7EJ46 135 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 ST18O60284 1047 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 NEK4P51957 841 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 CACNB3P54284 484 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 EVX2Q03828 476 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 TRDNQ13061 729 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 TBC1D10BQ4KMP7 808 aaPredicted RBP23■■□□□ 1.27
CHMP2B-204ENST00000472024 UPF3BQ9BZI7 483 aaKnown RBP23■■□□□ 1.27
CHMP2B-204ENST00000472024 SAP30BPQ9UHR5 308 aaKnown RBP23■■□□□ 1.27
CHMP2B-204ENST00000472024 PITPNM2Q9BZ72 1349 aa23■■□□□ 1.27
CHMP2B-204ENST00000472024 CLRN2A0PK11 232 aa22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 MCM2P49736 904 aa22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 HIRAP54198 1017 aaPredicted RBP22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 PDE4BQ07343 736 aa22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 TNFAIP1Q13829 316 aa22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 RALYLQ86SE5 291 aaKnown RBP22.99■■□□□ 1.27
CHMP2B-204ENST00000472024 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 DDTLA6NHG4 134 aaPredicted RBP22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 HLA-DOAP06340 250 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 MCM5P33992 734 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 ZNF287Q9HBT7 754 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 PI4KBQ9UBF8 816 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 SWAP70Q9UH65 585 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 HACL1Q9UJ83 578 aa22.98■■□□□ 1.27
CHMP2B-204ENST00000472024 TNNI2P48788 182 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 ANTXR2P58335 489 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 MAP3K10Q02779 954 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 USP50Q70EL3 339 aaPredicted RBP22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 APOBEC3FQ8IUX4 373 aaKnown RBP22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 FOXP4Q8IVH2 680 aaPredicted RBP22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 NKX2-3Q8TAU0 364 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 PDRG1Q9NUG6 133 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
CHMP2B-204ENST00000472024 IQCA1LA6NCM1 817 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 CD2BP2O95400 341 aaKnown RBP22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 CPA1P15085 419 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 ZC3H15Q8WU90 426 aaKnown RBP22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 ESR2Q92731 530 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 PPP2R3BQ9Y5P8 575 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 PLIN4Q96Q06 1357 aa22.96■■□□□ 1.27
CHMP2B-204ENST00000472024 POTECB2RU33 542 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 B4E1Z4 1266 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 TCP10L2B9ZVM9 353 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 TBC1D12O60347 775 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 CDK8P49336 464 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 EVCP57679 992 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 TCP10Q12799 353 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 ANKRD1Q15327 319 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 RBM26Q5T8P6 1007 aaKnown RBP22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 DYNLL2Q96FJ2 89 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 TEPSINQ96N21 525 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 VEZTQ9HBM0 779 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 ZSWIM5Q9P217 1185 aa22.95■■□□□ 1.26
CHMP2B-204ENST00000472024 ASTN2O75129 1339 aaPredicted RBP22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 RASA1P20936 1047 aa22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 CYB5R4Q7L1T6 521 aa22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 TMEM87BQ96K49 555 aa22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 TBC1D2Q9BYX2 928 aa22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 DNAJC18Q9H819 358 aa22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 HERC5Q9UII4 1024 aaKnown RBP22.94■■□□□ 1.26
CHMP2B-204ENST00000472024 PRC1O43663 620 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 KDM4AO75164 1064 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 SHMT1P34896 483 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 EPHX2P34913 555 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 AK2P54819 239 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 TOB2Q14106 344 aaPredicted RBP22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 RASA3Q14644 834 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 TATDN1Q6P1N9 297 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 TAF1DQ9H5J8 278 aaPredicted RBP22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 TCP11L1Q9NUJ3 509 aa22.93■■□□□ 1.26
CHMP2B-204ENST00000472024 NOVP48745 357 aa22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 ANGEL2Q5VTE6 544 aaKnown RBP22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 SLC44A5Q8NCS7 719 aa22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 IGDCC4Q8TDY8 1250 aa22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 CSRNP1Q96S65 589 aa22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 GREB1LQ9C091 1923 aaPredicted RBP22.92■■□□□ 1.26
CHMP2B-204ENST00000472024 SH2B2O14492 632 aaPredicted RBP22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 LIFRP42702 1097 aa22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 BECN1Q14457 450 aa22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 ANKS1AQ92625 1134 aa22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 TMEM39BQ9GZU3 492 aa22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 GGA3Q9NZ52 723 aa22.91■■□□□ 1.26
CHMP2B-204ENST00000472024 K7ELQ4 463 aaPredicted RBP22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 PRDM1O75626 825 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 SLC4A8Q2Y0W8 1093 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 Q6ZUG5 572 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 SGMS1Q86VZ5 419 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 HSCBQ8IWL3 235 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 NEDD1Q8NHV4 660 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 CCDC17Q96LX7 622 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 DEFB129Q9H1M3 183 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 MKNK2Q9HBH9 465 aa22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 ANGEL1Q9UNK9 670 aaKnown RBP22.9■■□□□ 1.26
CHMP2B-204ENST00000472024 SEC23AQ15436 765 aa22.89■■□□□ 1.25
CHMP2B-204ENST00000472024 CCDC178Q5BJE1 867 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms