RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 GLYCTKQ8IVS8 523 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 CCDC146Q8IYE0 955 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 PI4K2BQ8TCG2 481 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 SLC7A3Q8WY07 619 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 MKNK1Q9BUB5 465 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 TUT1Q9H6E5 874 aaKnown RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 SOX17Q9H6I2 414 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 SPC25Q9HBM1 224 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 CXXC1Q9P0U4 656 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 VAV3Q9UKW4 847 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 SH3BP5O60239 455 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 DNAJC6O75061 913 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 ABL1P00519 1130 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 P4HBP07237 508 aaKnown RBP4.36□□□□□ -1.71
SCN3A-207ENST00000471697 PAX3P23760 479 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 ITGAEP38570 1179 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 TNNI2P48788 182 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 TBX4P57082 545 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 ARHGAP4P98171 946 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 FKBP4Q02790 459 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCN3A-207ENST00000471697 PRKCQQ04759 706 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 FOXD4Q12950 439 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-207ENST00000471697 BIRC2Q13490 618 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 NFE2L2Q16236 605 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 OGFOD3Q6PK18 319 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 NCAPG2Q86XI2 1143 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 ETFBKMTQ8IXQ9 262 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 PNISRQ8TF01 805 aaKnown RBP4.36□□□□□ -1.71
SCN3A-207ENST00000471697 TMX1Q9H3N1 280 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 FAM13BQ9NYF5 915 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 PNMA2Q9UL42 364 aa4.36□□□□□ -1.71
SCN3A-207ENST00000471697 MRPL42Q9Y6G3 142 aaKnown RBP4.36□□□□□ -1.71
SCN3A-207ENST00000471697 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 NFICP08651 508 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 ZNF76P36508 570 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 ZNF211Q13398 564 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 HGSNATQ68CP4 663 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 TMC4Q7Z404 712 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 NETO1Q8TDF5 533 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 RPS6KC1Q96S38 1066 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 SEMA6CQ9H3T2 930 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 ACSS3Q9H6R3 686 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 ANO2Q9NQ90 1003 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 C1GALT1Q9NS00 363 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 TYW1Q9NV66 732 aaKnown RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 ABI2Q9NYB9 513 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 CRIM1Q9NZV1 1036 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 G3BP2Q9UN86 482 aaKnown RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 FNDC3AQ9Y2H6 1198 aaKnown RBP4.35□□□□□ -1.71
SCN3A-207ENST00000471697 RPS6KL1Q9Y6S9 549 aa4.35□□□□□ -1.71
SCN3A-207ENST00000471697 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SOX1O00570 391 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 TNFRSF10BO14763 440 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 ZBTB39O15060 712 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 PRC1O43663 620 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 EIF4EBP3O60516 100 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 S100BP04271 92 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 C1QTNF9P0C862 333 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 ADH5P11766 374 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 DAB2P98082 770 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 AMPD3Q01432 767 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 XPCQ01831 940 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SF3B2Q13435 895 aaKnown RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 KCNMB1Q16558 191 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SLC23A3Q6PIS1 610 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 KRBA2Q6ZNG9 492 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SYDE1Q6ZW31 735 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 FMNL3Q8IVF7 1028 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 MKL1Q969V6 931 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 MRFAP1L1Q96HT8 127 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SCYL1Q96KG9 808 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 C8orf48Q96LL4 319 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 FRMD6Q96NE9 622 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 USP26Q9BXU7 913 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 RBCK1Q9BYM8 510 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 GNL3LQ9NVN8 582 aaKnown RBP4.34□□□□□ -1.71
SCN3A-207ENST00000471697 PARP2Q9UGN5 583 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SEPT3Q9UH03 358 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 SALL4Q9UJQ4 1053 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 PRKAB1Q9Y478 270 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 ACTL7BQ9Y614 415 aa4.34□□□□□ -1.71
SCN3A-207ENST00000471697 PDE2AO00408 941 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 PPP1R12AO14974 1030 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 SORBS3O60504 671 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 STK10O94804 968 aaKnown RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 CYP2E1P05181 493 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 VIL1P09327 827 aaKnown RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 ZEB1P37275 1124 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 FMR1Q06787 632 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 CYP27C1Q4G0S4 372 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 C16orf46Q6P387 395 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 MCF2L2Q86YR7 1114 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 CNPY4Q8N129 248 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 PLD6Q8N2A8 252 aaKnown RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 RELTQ969Z4 430 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 MTA3Q9BTC8 594 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms