RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 TRIM22Q8IYM9 498 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
COL20A1-205ENST00000471582 PPP6R2O75170 966 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 FGRP09769 529 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 CMA1P23946 247 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 JMYQ8N9B5 988 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 ZNF384Q8TF68 577 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 SLC26A6Q9BXS9 759 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 ANO10Q9NW15 660 aa21.56■■□□□ 1.04
COL20A1-205ENST00000471582 TM4SF1P30408 202 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 NDUFA8P51970 172 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 TERF1P54274 439 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 GNL2Q13823 731 aaKnown RBP21.55■■□□□ 1.04
COL20A1-205ENST00000471582 AXDND1Q5T1B0 1012 aaPredicted RBP21.55■■□□□ 1.04
COL20A1-205ENST00000471582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.55■■□□□ 1.04
COL20A1-205ENST00000471582 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
COL20A1-205ENST00000471582 MINDY4BA8MYZ0 360 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 KLRK1P26718 216 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 ST5P78524 1137 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 IQCB1Q15051 598 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 SEC23AQ15436 765 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 ZNF654Q8IZM8 581 aa21.55■■□□□ 1.04
COL20A1-205ENST00000471582 KIAA1551Q9HCM1 1747 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 A0A1B0GVL5 298 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 PLA2G4DQ86XP0 818 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 FLAD1Q8NFF5 587 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
COL20A1-205ENST00000471582 TNKSO95271 1327 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 IRS2Q9Y4H2 1338 aa21.54■■□□□ 1.04
COL20A1-205ENST00000471582 PRR5LQ6MZQ0 368 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 FANCBQ8NB91 859 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 SDF4Q9BRK5 362 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 DEXIO95424 95 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 DYNLL1P63167 89 aaKnown RBP21.53■■□□□ 1.04
COL20A1-205ENST00000471582 MECOMQ03112 1051 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 PTPAQ15257 358 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 SARM1Q6SZW1 724 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
COL20A1-205ENST00000471582 MAP3K14Q99558 947 aa21.53■■□□□ 1.04
COL20A1-205ENST00000471582 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.53■■□□□ 1.04
COL20A1-205ENST00000471582 LAMB1P07942 1786 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 DLEC1Q9Y238 1755 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 MMP1P03956 469 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 ZNF75DP51815 510 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 GRAPQ13588 217 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 SAFBQ15424 915 aaKnown RBP eCLIP21.52■■□□□ 1.04
COL20A1-205ENST00000471582 C11orf57Q6ZUT1 292 aaPredicted RBP21.52■■□□□ 1.04
COL20A1-205ENST00000471582 NOSTRINQ8IVI9 506 aa21.52■■□□□ 1.04
COL20A1-205ENST00000471582 GRAPLQ8TC17 118 aaPredicted RBP21.52■■□□□ 1.04
COL20A1-205ENST00000471582 CCDC88AQ3V6T2 1871 aa21.52■■□□□ 1.03
COL20A1-205ENST00000471582 BAZ2AQ9UIF9 1905 aaKnown RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 FAM237AA0A1B0GTK4 181 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 GOLGA6L19H0YKK7 550 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 SERPINB2P05120 415 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 CEP57L1Q8IYX8 460 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 RPGRQ92834 1020 aaKnown RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 TIGD1Q96MW7 591 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 ZSCAN10Q96SZ4 725 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 NAT10Q9H0A0 1025 aaKnown RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 TTC12Q9H892 705 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 ATP8A2Q9NTI2 1148 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 SPTY2D1Q68D10 685 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 CTR9Q6PD62 1173 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 FOXP1Q9H334 677 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-205ENST00000471582 KIAA1468Q9P260 1216 aa21.51■■□□□ 1.03
COL20A1-205ENST00000471582 PFKFB1P16118 471 aa21.5■■□□□ 1.03
COL20A1-205ENST00000471582 CDC25BP30305 580 aa21.5■■□□□ 1.03
COL20A1-205ENST00000471582 ENAHQ8N8S7 591 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-205ENST00000471582 RNF26Q9BY78 433 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-205ENST00000471582 TRIM5Q9C035 493 aa21.5■■□□□ 1.03
COL20A1-205ENST00000471582 ORC4O43929 436 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 WDHD1O75717 1129 aaPredicted RBP21.49■■□□□ 1.03
COL20A1-205ENST00000471582 ZNF202O95125 648 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 IQCA1Q86XH1 822 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
COL20A1-205ENST00000471582 ZNF830Q96NB3 372 aaPredicted RBP21.49■■□□□ 1.03
COL20A1-205ENST00000471582 HPSEQ9Y251 543 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL20A1-205ENST00000471582 LEMD3Q9Y2U8 911 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 TPM2P07951 284 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 NT5C2P49902 561 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 BPIFA3Q9BQP9 254 aa21.49■■□□□ 1.03
COL20A1-205ENST00000471582 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 CUTAO60888 179 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 CALM1P0DP23 149 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 CALM2P0DP24 149 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 CALM3P0DP25 149 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 SBK1Q52WX2 424 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 DIS3L2Q8IYB7 885 aaKnown RBP21.48■■□□□ 1.03
COL20A1-205ENST00000471582 STK11IPQ8N1F8 1099 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 NUP133Q8WUM0 1156 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 CAMKK2Q96RR4 588 aa21.48■■□□□ 1.03
COL20A1-205ENST00000471582 DCP1AQ9NPI6 582 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms