RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 GBP3Q9H0R5 595 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 MYH7P12883 1935 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 CPDO75976 1380 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 IFIT1P09914 478 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 MYL6BP14649 208 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 ATP2B1P20020 1258 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 CASP7P55210 303 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 CCDC91Q7Z6B0 441 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 NUTM2AQ8IVF1 878 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 OTUD6BQ8N6M0 293 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 PDILTQ8N807 584 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 CNNM3Q8NE01 707 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 CDC23Q9UJX2 597 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 KCNH3Q9ULD8 1083 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 RRP15Q9Y3B9 282 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
SRGAP3-204ENST00000470951 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 H3BQF6 201 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 C11orf91Q3C1V1 193 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 MAP3K14Q99558 947 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 A0A087WZG4 1122 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 M0R2C6 588 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 KIF3CO14782 793 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 TTLL5Q6EMB2 1281 aa12.89□□□□□ -0.35
SRGAP3-204ENST00000470951 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 KIF5CO60282 957 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 TRDNQ13061 729 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 ALG1Q9BT22 464 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 AKR1B15C9JRZ8 316 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 CIAO1O76071 339 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 ANTXR2P58335 489 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 KRT40Q6A162 431 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 KANK3Q6NY19 840 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 FOXP4Q8IVH2 680 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 OSBP2Q969R2 916 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 ANKZF1Q9H8Y5 726 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 L1RE1Q9UN81 338 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
SRGAP3-204ENST00000470951 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 NR1I3Q14994 352 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 C10orf67Q8IYJ2 551 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 FAM71BQ8TC56 605 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 LAMB4A4D0S4 1761 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 H7C1W4 665 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 FGAP02671 866 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 BMP6P22004 513 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 GYS2P54840 703 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 FOXO4P98177 505 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 PDE4BQ07343 736 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 TTC39AQ5SRH9 613 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 VPS18Q9P253 973 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
SRGAP3-204ENST00000470951 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms