RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MAGEB6P1A0A0J9YX57 407 aa19.03■□□□□ 0.64
HDAC6-218ENST00000470942 TRIM34Q9BYJ4 488 aa19.03■□□□□ 0.64
HDAC6-218ENST00000470942 ZFYVE28Q9HCC9 887 aa19.03■□□□□ 0.64
HDAC6-218ENST00000470942 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
HDAC6-218ENST00000470942 ZHX2Q9Y6X8 837 aa19.03■□□□□ 0.64
HDAC6-218ENST00000470942 ZNF532Q9HCE3 1301 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 MYH7P12883 1935 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 BTBD19C9JJ37 291 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 PTPRAP18433 802 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-218ENST00000470942 GPATCH3Q96I76 525 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 ECHDC1Q9NTX5 307 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 HERC5Q9UII4 1024 aaKnown RBP19.02■□□□□ 0.64
HDAC6-218ENST00000470942 KCNH4Q9UQ05 1017 aa19.02■□□□□ 0.64
HDAC6-218ENST00000470942 SIPA1L1O43166 1804 aa19.02■□□□□ 0.63
HDAC6-218ENST00000470942 HLA-DOAP06340 250 aa19.01■□□□□ 0.63
HDAC6-218ENST00000470942 SLC4A8Q2Y0W8 1093 aa19.01■□□□□ 0.63
HDAC6-218ENST00000470942 FOXP4Q8IVH2 680 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-218ENST00000470942 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.634e-7■■■■■ 29.1
HDAC6-218ENST00000470942 PHIPQ8WWQ0 1821 aa19■□□□□ 0.63
HDAC6-218ENST00000470942 CCDC85CA6NKD9 419 aa19■□□□□ 0.63
HDAC6-218ENST00000470942 CXCL11O14625 94 aa19■□□□□ 0.63
HDAC6-218ENST00000470942 RIOK1Q9BRS2 568 aaKnown RBP19■□□□□ 0.63
HDAC6-218ENST00000470942 FRMD4AQ9P2Q2 1039 aaPredicted RBP19■□□□□ 0.63
HDAC6-218ENST00000470942 ZBTB47Q9UFB7 747 aaPredicted RBP19■□□□□ 0.63
HDAC6-218ENST00000470942 CAP2P40123 477 aa18.99■□□□□ 0.63
HDAC6-218ENST00000470942 ANKRD23Q86SG2 305 aa18.99■□□□□ 0.63
HDAC6-218ENST00000470942 CCDC84Q86UT8 332 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-218ENST00000470942 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
HDAC6-218ENST00000470942 ZCCHC17Q9NP64 241 aaKnown RBP18.99■□□□□ 0.63
HDAC6-218ENST00000470942 AFG3L2Q9Y4W6 797 aa18.99■□□□□ 0.63
HDAC6-218ENST00000470942 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 ADD2P35612 726 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 SP3Q02447 781 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 RRP1BQ14684 758 aaKnown RBP18.98■□□□□ 0.63
HDAC6-218ENST00000470942 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 GADL1Q6ZQY3 521 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 ERO1AQ96HE7 468 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 NAV1Q8NEY1 1877 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 PTPRFP10586 1907 aa18.98■□□□□ 0.63
HDAC6-218ENST00000470942 TRIM75PA6NK02 468 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 PDHXO00330 501 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
HDAC6-218ENST00000470942 SLFNL1Q499Z3 407 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 FASTKD5Q7L8L6 764 aaKnown RBP18.97■□□□□ 0.63
HDAC6-218ENST00000470942 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
HDAC6-218ENST00000470942 A0A0G2JLL6 359 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-218ENST00000470942 POLR3DP05423 398 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-218ENST00000470942 AAMPQ13685 434 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 MOGSQ13724 837 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 PRRT2Q7Z6L0 340 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-218ENST00000470942 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
HDAC6-218ENST00000470942 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 ARMT1Q9H993 441 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
HDAC6-218ENST00000470942 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
HDAC6-218ENST00000470942 USP17L5A8MUK1 530 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 TLR2O60603 784 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 MBD4O95243 580 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 GDF11O95390 407 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 SPP2Q13103 211 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 UBE3CQ15386 1083 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 GCC1Q96CN9 775 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
HDAC6-218ENST00000470942 ERC2O15083 957 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 CHGBP05060 677 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 HDAC1Q13547 482 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-218ENST00000470942 GPAT2Q6NUI2 795 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 ZNF280CQ8ND82 737 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 OTUD7AQ8TE49 926 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-218ENST00000470942 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 TBC1D2Q9BYX2 928 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
HDAC6-218ENST00000470942 ASNSP08243 561 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-218ENST00000470942 OTOP1Q7RTM1 612 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 KBTBD3Q8NAB2 608 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 PARK7Q99497 189 aaKnown RBP18.93■□□□□ 0.62
HDAC6-218ENST00000470942 EHD4Q9H223 541 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 HPS5Q9UPZ3 1129 aa18.93■□□□□ 0.62
HDAC6-218ENST00000470942 BAZ2AQ9UIF9 1905 aaKnown RBP18.93■□□□□ 0.62
HDAC6-218ENST00000470942 PRKAB2O43741 272 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 MX1P20591 662 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 PLCD1P51178 756 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 JAG1P78504 1218 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 KIF22Q14807 665 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 ARHGEF6Q15052 776 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-218ENST00000470942 DCP1AQ9NPI6 582 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-218ENST00000470942 CPA4Q9UI42 421 aa18.92■□□□□ 0.62
HDAC6-218ENST00000470942 DDX60LQ5H9U9 1706 aaKnown RBP18.91■□□□□ 0.62
HDAC6-218ENST00000470942 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms