RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 LIFRP42702 1097 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 PLCD1P51178 756 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 SART3Q15020 963 aaKnown RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 RRP12Q5JTH9 1297 aaKnown RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 C16orf86Q6ZW13 317 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 IGDCC4Q8TDY8 1250 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 BRF1Q92994 677 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 TDRD3Q9H7E2 651 aaKnown RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 MYOZ2Q9NPC6 264 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 TOMM22Q9NS69 142 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
COL4A5-203ENST00000470339 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
COL4A5-203ENST00000470339 MYO1BO43795 1136 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 PICALMQ13492 652 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 ME3Q16798 604 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 SPDYE2Q495Y8 402 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
COL4A5-203ENST00000470339 CHST3Q7LGC8 479 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 EHD4Q9H223 541 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 FAM198AQ9UFP1 575 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 GJA3Q9Y6H8 435 aa17.81■□□□□ 0.44
COL4A5-203ENST00000470339 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 ZNF541Q9H0D2 1346 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
COL4A5-203ENST00000470339 HLA-DOAP06340 250 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 GABPAQ06546 454 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 NFIAQ12857 509 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 CCDC178Q5BJE1 867 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 SGMS1Q86VZ5 419 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 MKNK2Q9HBH9 465 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 ZNF70Q9UC06 446 aaPredicted RBP17.8■□□□□ 0.44
COL4A5-203ENST00000470339 SWAP70Q9UH65 585 aa17.8■□□□□ 0.44
COL4A5-203ENST00000470339 CNOT7Q9UIV1 285 aaKnown RBP17.8■□□□□ 0.44
COL4A5-203ENST00000470339 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
COL4A5-203ENST00000470339 ERICH2A1L162 156 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 IFIT3O14879 490 aaKnown RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 PFKFB2O60825 505 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 CDK8P49336 464 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 GPR162Q16538 588 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 FAM83AQ86UY5 434 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 FOXP4Q8IVH2 680 aaPredicted RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 UBAC1Q9BSL1 405 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 PI4KBQ9UBF8 816 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
COL4A5-203ENST00000470339 UTRNP46939 3433 aa17.79■□□□□ 0.44
COL4A5-203ENST00000470339 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
COL4A5-203ENST00000470339 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 H7C1D1 291 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 WNT10BO00744 389 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 DDIT3P35638 169 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 EVX2Q03828 476 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 METTL16Q86W50 562 aaKnown RBP17.78■□□□□ 0.44
COL4A5-203ENST00000470339 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 STK11IPQ8N1F8 1099 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 FAM151AQ8WW52 585 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 DYNLL2Q96FJ2 89 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
COL4A5-203ENST00000470339 LY9Q9HBG7 655 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 TCP11L1Q9NUJ3 509 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
COL4A5-203ENST00000470339 PRDM1O75626 825 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 LARGE1O95461 756 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 PDIA3P30101 505 aaKnown RBP17.77■□□□□ 0.44
COL4A5-203ENST00000470339 RCAN1P53805 252 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 WTAPQ15007 396 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 SEC23AQ15436 765 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 C9orf131Q5VYM1 1079 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 ZFPM1Q8IX07 1006 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 SLKQ9H2G2 1235 aaPredicted RBP17.77■□□□□ 0.44
COL4A5-203ENST00000470339 GPRC5DQ9NZD1 345 aa17.77■□□□□ 0.44
COL4A5-203ENST00000470339 TSPY2A6NKD2 308 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 RASA1P20936 1047 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 CACNB3P54284 484 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 TFAP4Q01664 338 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 TCP10Q12799 353 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 ANKS1AQ92625 1134 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
COL4A5-203ENST00000470339 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
COL4A5-203ENST00000470339 BRPF3Q9ULD4 1205 aa17.76■□□□□ 0.43
COL4A5-203ENST00000470339 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
COL4A5-203ENST00000470339 TNNI2P48788 182 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 SLC4A8Q2Y0W8 1093 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 NBPF9Q3BBW0 867 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 SYNE3Q6ZMZ3 975 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms