RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 MRFAP1L1Q96HT8 127 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.2■■□□□ 1.3
CDHR3-207ENST00000470188 MROH7-TTC4A0A0A0MT08 1334 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 SLC3A2P08195 630 aaKnown RBP23.2■■□□□ 1.3
CDHR3-207ENST00000470188 GTF2E1P29083 439 aaPredicted RBP23.2■■□□□ 1.3
CDHR3-207ENST00000470188 KCNQ4P56696 695 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 TPD52L1Q16890 204 aaPredicted RBP23.2■■□□□ 1.3
CDHR3-207ENST00000470188 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 AOPEPQ8N6M6 819 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 SDR42E1Q8WUS8 393 aa23.2■■□□□ 1.3
CDHR3-207ENST00000470188 DDX41Q9UJV9 622 aaKnown RBP23.2■■□□□ 1.3
CDHR3-207ENST00000470188 WTIPA6NIX2 430 aaPredicted RBP23.19■■□□□ 1.3
CDHR3-207ENST00000470188 PTPAQ15257 358 aa23.19■■□□□ 1.3
CDHR3-207ENST00000470188 MAP3K14Q99558 947 aa23.19■■□□□ 1.3
CDHR3-207ENST00000470188 MINPP1Q9UNW1 487 aa23.19■■□□□ 1.3
CDHR3-207ENST00000470188 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
CDHR3-207ENST00000470188 COL1A1P02452 1464 aaPredicted RBP23.19■■□□□ 1.3
CDHR3-207ENST00000470188 TRIM22Q8IYM9 498 aa23.18■■□□□ 1.3
CDHR3-207ENST00000470188 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
CDHR3-207ENST00000470188 CACTINQ8WUQ7 758 aaKnown RBP23.18■■□□□ 1.3
CDHR3-207ENST00000470188 UBAC1Q9BSL1 405 aa23.18■■□□□ 1.3
CDHR3-207ENST00000470188 CNTNAP4Q9C0A0 1308 aa23.18■■□□□ 1.3
CDHR3-207ENST00000470188 DPCR1Q3MIW9 517 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 TBC1D9BQ66K14 1250 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 MORC2Q9Y6X9 1032 aaPredicted RBP23.17■■□□□ 1.3
CDHR3-207ENST00000470188 SPATA31A6Q5VVP1 1343 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 CCDC196A0A1B0GTZ2 297 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 CCDC144BQ3MJ40 725 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 CEP135Q66GS9 1140 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 CELF1Q92879 486 aaKnown RBP23.17■■□□□ 1.3
CDHR3-207ENST00000470188 C8orf37Q96NL8 207 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 RIOK1Q9BRS2 568 aaKnown RBP23.17■■□□□ 1.3
CDHR3-207ENST00000470188 ANAPC4Q9UJX5 808 aa23.17■■□□□ 1.3
CDHR3-207ENST00000470188 A0A1B0GUL6 1792 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 RGL2O15211 777 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 GUCY1A2P33402 732 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 SYKP43405 635 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 RCAN1P53805 252 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
CDHR3-207ENST00000470188 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDHR3-207ENST00000470188 SLC10A5Q5PT55 438 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 TIGD1Q96MW7 591 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 SHC4Q6S5L8 630 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 NOSTRINQ8IVI9 506 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 ZNF654Q8IZM8 581 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 ESR2Q92731 530 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 FAM84BQ96KN1 310 aaPredicted RBP23.16■■□□□ 1.3
CDHR3-207ENST00000470188 BPIFA3Q9BQP9 254 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 HPSEQ9Y251 543 aa23.16■■□□□ 1.3
CDHR3-207ENST00000470188 MMP1P03956 469 aa23.15■■□□□ 1.3
CDHR3-207ENST00000470188 SMIM5Q71RC9 77 aa23.15■■□□□ 1.3
CDHR3-207ENST00000470188 NUP133Q8WUM0 1156 aa23.15■■□□□ 1.3
CDHR3-207ENST00000470188 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.15■■□□□ 1.3
CDHR3-207ENST00000470188 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
CDHR3-207ENST00000470188 NLRP12P59046 1061 aa23.14■■□□□ 1.3
CDHR3-207ENST00000470188 NBPF11Q86T75 865 aa23.14■■□□□ 1.3
CDHR3-207ENST00000470188 CRACR2BQ8N4Y2 399 aaPredicted RBP23.14■■□□□ 1.3
CDHR3-207ENST00000470188 FANCBQ8NB91 859 aa23.14■■□□□ 1.3
CDHR3-207ENST00000470188 NGLY1Q96IV0 654 aa23.14■■□□□ 1.3
CDHR3-207ENST00000470188 TAF1P21675 1872 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 BIN1O00499 593 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 DEXIO95424 95 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 LRRC8AQ8IWT6 810 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 NYXQ9GZU5 481 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 SCN7AQ01118 1682 aa23.14■■□□□ 1.29
CDHR3-207ENST00000470188 TNKSO95271 1327 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 BTBD18B2RXH4 712 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 CUTAO60888 179 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 RESP18Q5W5W9 173 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 DIS3L2Q8IYB7 885 aaKnown RBP23.13■■□□□ 1.29
CDHR3-207ENST00000470188 KIF18AQ8NI77 898 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 KCNJ14Q9UNX9 436 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 FAM237AA0A1B0GTK4 181 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 DYNLL1P63167 89 aaKnown RBP23.13■■□□□ 1.29
CDHR3-207ENST00000470188 SEC23AQ15436 765 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 ZNF771Q7L3S4 317 aaPredicted RBP23.13■■□□□ 1.29
CDHR3-207ENST00000470188 CMTR1Q8N1G2 835 aaKnown RBP23.13■■□□□ 1.29
CDHR3-207ENST00000470188 CLIC6Q96NY7 704 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 NARFQ9UHQ1 456 aa23.13■■□□□ 1.29
CDHR3-207ENST00000470188 SEMA3EO15041 775 aa23.12■■□□□ 1.29
CDHR3-207ENST00000470188 ZNF397Q8NF99 534 aaPredicted RBP23.12■■□□□ 1.29
CDHR3-207ENST00000470188 SETDB2Q96T68 719 aa23.12■■□□□ 1.29
CDHR3-207ENST00000470188 BRIP1Q9BX63 1249 aa23.12■■□□□ 1.29
CDHR3-207ENST00000470188 RPS8P62241 208 aaKnown RBP23.11■■□□□ 1.29
CDHR3-207ENST00000470188 VPS72Q15906 364 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 NLRP3Q96P20 1036 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 FOXP1Q9H334 677 aaPredicted RBP23.11■■□□□ 1.29
CDHR3-207ENST00000470188 CASZ1Q86V15 1759 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 SMIM22K7EJ46 135 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 NYAP1Q6ZVC0 841 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 NBPF5PQ86XG9 351 aaPredicted RBP23.11■■□□□ 1.29
CDHR3-207ENST00000470188 KCND1Q9NSA2 647 aa23.11■■□□□ 1.29
CDHR3-207ENST00000470188 SRP68Q9UHB9 627 aaKnown RBP23.11■■□□□ 1.29
CDHR3-207ENST00000470188 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
CDHR3-207ENST00000470188 KRI1Q8N9T8 703 aaKnown RBP23.1■■□□□ 1.29
CDHR3-207ENST00000470188 ZNF384Q8TF68 577 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms