RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 FLIIQ13045 1269 aa15.96■□□□□ 0.15
HDAC6-217ENST00000469223 NUDT12Q9BQG2 462 aa15.96■□□□□ 0.15
HDAC6-217ENST00000469223 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-217ENST00000469223 RFX7Q2KHR2 1363 aa15.96■□□□□ 0.15
HDAC6-217ENST00000469223 PEX10O60683 326 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 XRCC5P13010 732 aaKnown RBP15.95■□□□□ 0.14
HDAC6-217ENST00000469223 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-217ENST00000469223 CAVIN4Q5BKX8 364 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
HDAC6-217ENST00000469223 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 RNPC3Q96LT9 517 aaKnown RBP15.95■□□□□ 0.14
HDAC6-217ENST00000469223 C1QTNF1Q9BXJ1 281 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-217ENST00000469223 MORF4L1Q9UBU8 362 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 GBF1Q92538 1859 aa15.95■□□□□ 0.14
HDAC6-217ENST00000469223 DNAJB2P25686 324 aa15.94■□□□□ 0.14
HDAC6-217ENST00000469223 RGS3P49796 1198 aa15.94■□□□□ 0.14
HDAC6-217ENST00000469223 HMGCS2P54868 508 aa15.94■□□□□ 0.14
HDAC6-217ENST00000469223 PDE3AQ14432 1141 aa15.94■□□□□ 0.14
HDAC6-217ENST00000469223 WDR43Q15061 677 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC6-217ENST00000469223 NECAB3Q96P71 396 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-217ENST00000469223 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
HDAC6-217ENST00000469223 CTNND1O60716 968 aaKnown RBP15.93■□□□□ 0.14
HDAC6-217ENST00000469223 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
HDAC6-217ENST00000469223 CALD1Q05682 793 aaKnown RBP15.93■□□□□ 0.14
HDAC6-217ENST00000469223 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC6-217ENST00000469223 SH3BP5LQ7L8J4 393 aa15.93■□□□□ 0.14
HDAC6-217ENST00000469223 ZSCAN29Q8IWY8 852 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-217ENST00000469223 APBA2Q99767 749 aa15.93■□□□□ 0.14
HDAC6-217ENST00000469223 PDLIM7Q9NR12 457 aa15.93■□□□□ 0.14
HDAC6-217ENST00000469223 MROH5Q6ZUA9 1318 aa15.93■□□□□ 0.14
HDAC6-217ENST00000469223 RGS2P41220 211 aa15.92■□□□□ 0.14
HDAC6-217ENST00000469223 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
HDAC6-217ENST00000469223 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
HDAC6-217ENST00000469223 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
HDAC6-217ENST00000469223 ARIH1Q9Y4X5 557 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-217ENST00000469223 DNM1LO00429 736 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 SPP2Q13103 211 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 TRIM60Q495X7 471 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 METTL24Q5JXM2 366 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 USP6NLQ92738 828 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 SNX27Q96L92 541 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 GAS2L1Q99501 681 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-217ENST00000469223 ZNF576Q9H609 170 aa15.91■□□□□ 0.14
HDAC6-217ENST00000469223 DDTLA6NHG4 134 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-217ENST00000469223 PRDX5P30044 214 aa15.9■□□□□ 0.14
HDAC6-217ENST00000469223 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-217ENST00000469223 SH3RF1Q7Z6J0 888 aa15.9■□□□□ 0.14
HDAC6-217ENST00000469223 LRFN3Q9BTN0 628 aa15.9■□□□□ 0.14
HDAC6-217ENST00000469223 TXNRD2Q9NNW7 524 aa15.9■□□□□ 0.14
HDAC6-217ENST00000469223 DDX20Q9UHI6 824 aaKnown RBP15.9■□□□□ 0.14
HDAC6-217ENST00000469223 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
HDAC6-217ENST00000469223 TRIM43BA6NCK2 446 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 FAM196BA6NMK8 535 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 ENTPD3O75355 529 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 EPHB4P54760 987 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 MAP3K10Q02779 954 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 VGLL2Q8N8G2 317 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 LPAR1Q92633 364 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 TRIM43Q96BQ3 446 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-217ENST00000469223 PORCNQ9H237 461 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 SIPA1L1O43166 1804 aa15.89■□□□□ 0.13
HDAC6-217ENST00000469223 LRRC37A2A6NM11 1700 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 CNGA1P29973 690 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 MAPK4P31152 587 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 CCDC85BQ15834 202 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-217ENST00000469223 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-217ENST00000469223 LRRC24Q50LG9 513 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 MORN1Q5T089 497 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 AKNAD1Q5T1N1 836 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-217ENST00000469223 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
HDAC6-217ENST00000469223 GPR142Q7Z601 462 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 ALYREFQ86V81 257 aaKnown RBP15.88■□□□□ 0.13
HDAC6-217ENST00000469223 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 WDR66Q8TBY9 1149 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 TIFAQ96CG3 184 aa15.88■□□□□ 0.13
HDAC6-217ENST00000469223 WDFY4Q6ZS81 3184 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 F6X3S4 739 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 GRM8O00222 908 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 PICALMQ13492 652 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 SLC39A5Q6ZMH5 540 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 CCAR1Q8IX12 1150 aaKnown RBP15.87■□□□□ 0.13
HDAC6-217ENST00000469223 IDI2Q9BXS1 227 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 PRDM12Q9H4Q4 367 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 DDX4Q9NQI0 724 aaKnown RBP15.87■□□□□ 0.13
HDAC6-217ENST00000469223 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
HDAC6-217ENST00000469223 APAF1O14727 1248 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 MSCO60682 206 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 PDE8BO95263 885 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 HERVK_113P62684 666 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 SNX17Q15036 470 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 MFSD14CQ5VZR4 134 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 PLEKHH3Q7Z736 793 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
HDAC6-217ENST00000469223 PAGR1Q9BTK6 254 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 CWC22Q9HCG8 908 aaKnown RBP15.86■□□□□ 0.13
HDAC6-217ENST00000469223 UTYO14607 1347 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms