RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 PRRT2Q7Z6L0 340 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 RPAP2Q8IXW5 612 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 HOXD10P28358 340 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 CAP2P40123 477 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 RRP1BQ14684 758 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 SLC4A8Q2Y0W8 1093 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 CRACR2BQ8N4Y2 399 aaPredicted RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 ARMC5Q96C12 935 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 DHX36Q9H2U1 1008 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 ANTXR1Q9H6X2 564 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
TGFBR3-205ENST00000468996 GNRH1P01148 92 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 IFIT2P09913 472 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 CTGFP29279 349 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 USP5P45974 858 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 ZNF280CQ8ND82 737 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 SMCR8Q8TEV9 937 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 KIF1BPQ96EK5 621 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-205ENST00000468996 USP17L5A8MUK1 530 aa12.95□□□□□ -0.34
TGFBR3-205ENST00000468996 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
TGFBR3-205ENST00000468996 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
TGFBR3-205ENST00000468996 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
TGFBR3-205ENST00000468996 FLT1P17948 1338 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 IGSF3O75054 1194 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 BCRP11274 1271 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 OSBPP22059 807 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 HMGCS2P54868 508 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 PRMT2P55345 433 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 DNAJC2Q99543 621 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 SRRDQ9UH36 339 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 LAMB1P07942 1786 aa12.94□□□□□ -0.34
TGFBR3-205ENST00000468996 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 GOLIM4O00461 696 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 GDF11O95390 407 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 FCGRTP55899 365 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 JAG1P78504 1218 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 SLC9C2Q5TAH2 1124 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 AS3MTQ9HBK9 375 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 AGTPBP1Q9UPW5 1226 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 SLC45A1Q9Y2W3 748 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 HTTP42858 3142 aa12.93□□□□□ -0.34
TGFBR3-205ENST00000468996 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 ASNSP08243 561 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 PDE3AQ14432 1141 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 CERS3Q8IU89 383 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
TGFBR3-205ENST00000468996 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 CENPFP49454 3210 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 GRK4P32298 578 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 PRKCZQ05513 592 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 PABPC4Q13310 644 aaKnown RBP eCLIP12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 MTMR2Q13614 643 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 PROCA1Q8NCQ7 364 aaPredicted RBP12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 BOLA2Q9H3K6 86 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 TMOD4Q9NZQ9 345 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 GABRQQ9UN88 632 aa12.91□□□□□ -0.34
TGFBR3-205ENST00000468996 POLR3DP05423 398 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 PDE6AP16499 860 aa12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 BACE1P56817 501 aa12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 MTFR1Q15390 333 aa12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 TTC6Q86TZ1 520 aa12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-205ENST00000468996 ZNF532Q9HCE3 1301 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 USP17L10C9JJH3 530 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 GH2P01242 217 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms