RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 SNCAIPQ9Y6H5 919 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 PPATQ06203 517 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 MKRN3Q13064 507 aaKnown RBP17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 PLEKHM2Q8IWE5 1019 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 ARMT1Q9H993 441 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 TAOK2Q9UL54 1235 aa17.81■□□□□ 0.44
TMEM39A-205ENST00000468676 FOXN1O15353 648 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 NEFLP07196 543 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 GTF2A2P52657 109 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 PPIL2Q13356 520 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 SCYL3Q8IZE3 742 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 CRACR2BQ8N4Y2 399 aaPredicted RBP17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 OTUD5Q96G74 571 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 LAMB1P07942 1786 aa17.8■□□□□ 0.44
TMEM39A-205ENST00000468676 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 GJA5P36382 358 aa17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 SLFNL1Q499Z3 407 aa17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 OTUD7BQ6GQQ9 843 aa17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 EHD4Q9H223 541 aa17.79■□□□□ 0.44
TMEM39A-205ENST00000468676 TESPA1A2RU30 521 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 POLR3DP05423 398 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 GNAT2P19087 354 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 SNAPC2Q13487 334 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 DCP1AQ9NPI6 582 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
TMEM39A-205ENST00000468676 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 CHGBP05060 677 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 CETPP11597 493 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 CAP2P40123 477 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 OSBP2Q969R2 916 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 RNF186Q9NXI6 227 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 SLC4A4Q9Y6R1 1079 aa17.77■□□□□ 0.44
TMEM39A-205ENST00000468676 NAV1Q8NEY1 1877 aa17.77■□□□□ 0.43
TMEM39A-205ENST00000468676 DOCK1Q14185 1865 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 FAM196BA6NMK8 535 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 CXCL11O14625 94 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 IRF6O14896 467 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 TRPA1O75762 1119 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 HSPA8P11142 646 aaKnown RBP17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 PTPRAP18433 802 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 ZMYM1Q5SVZ6 1142 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 IFNL1Q8IU54 200 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 PRDM10Q9NQV6 1147 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 SIPA1L1O43166 1804 aa17.76■□□□□ 0.43
TMEM39A-205ENST00000468676 GPAA1O43292 621 aa17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 PRKAB2O43741 272 aa17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 CENPQQ7L2Z9 268 aaPredicted RBP17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 CFHR5Q9BXR6 569 aa17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 KCNH4Q9UQ05 1017 aa17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
TMEM39A-205ENST00000468676 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 ASNSP08243 561 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 PLCD1P51178 756 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 LBX1P52954 281 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 CCL15Q16663 113 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 TATDN1Q6P1N9 297 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 RILPL2Q969X0 211 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 DNAJC18Q9H819 358 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 ZCCHC17Q9NP64 241 aaKnown RBP17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 BAZ2AQ9UIF9 1905 aaKnown RBP17.74■□□□□ 0.43
TMEM39A-205ENST00000468676 M0R2C6 588 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 BRI3BPQ8WY22 251 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 SWAP70Q9UH65 585 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
TMEM39A-205ENST00000468676 ATAD5Q96QE3 1844 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 USP17L5A8MUK1 530 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 USP17L21D6R901 530 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 HIP1O00291 1037 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 PDE4AP27815 886 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 GABPAQ06546 454 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 NOM1Q5C9Z4 860 aaKnown RBP17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms