RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
COL27A1-203ENST00000468565 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 FKTNO75072 461 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 CAPN15O75808 1086 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 ATP5JP18859 108 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 CRHR2Q13324 411 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 FLT1P17948 1338 aa17.54■□□□□ 0.4
COL27A1-203ENST00000468565 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
COL27A1-203ENST00000468565 PCDHB15Q9Y5E8 787 aa17.54■□□□□ 0.4
COL27A1-203ENST00000468565 NAV1Q8NEY1 1877 aa17.54■□□□□ 0.4
COL27A1-203ENST00000468565 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 TGFBRAP1Q8WUH2 860 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 DNAJC2Q99543 621 aaKnown RBP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 HERC5Q9UII4 1024 aaKnown RBP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 GOLIM4O00461 696 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 MAPKAPK5Q8IW41 473 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 FAM43AQ8N2R8 423 aa17.53■□□□□ 0.4
COL27A1-203ENST00000468565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL27A1-203ENST00000468565 CXCL11O14625 94 aa17.52■□□□□ 0.4
COL27A1-203ENST00000468565 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-203ENST00000468565 SLURP2P0DP57 97 aa17.52■□□□□ 0.4
COL27A1-203ENST00000468565 TAF1CQ15572 869 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-203ENST00000468565 MIGA1Q8NAN2 632 aa17.52■□□□□ 0.4
COL27A1-203ENST00000468565 HAUS7Q99871 368 aa17.52■□□□□ 0.4
COL27A1-203ENST00000468565 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
COL27A1-203ENST00000468565 PDE6AP16499 860 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 PTPRAP18433 802 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
COL27A1-203ENST00000468565 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 BTBD19C9JJ37 291 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
COL27A1-203ENST00000468565 RIOK1Q9BRS2 568 aaKnown RBP17.51■□□□□ 0.39
COL27A1-203ENST00000468565 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
COL27A1-203ENST00000468565 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
COL27A1-203ENST00000468565 ANKRD23Q86SG2 305 aa17.5■□□□□ 0.39
COL27A1-203ENST00000468565 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
COL27A1-203ENST00000468565 FOXP4Q8IVH2 680 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-203ENST00000468565 ZHX2Q9Y6X8 837 aa17.5■□□□□ 0.39
COL27A1-203ENST00000468565 MOGSQ13724 837 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
COL27A1-203ENST00000468565 ERO1AQ96HE7 468 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 ECHDC1Q9NTX5 307 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 LOC285556D6RIA3 1793 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 ZNF532Q9HCE3 1301 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 TCRBV5S4A2TA0A5A2 114 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 CAP2P40123 477 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 USP5P45974 858 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 AAMPQ13685 434 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
COL27A1-203ENST00000468565 A0A0G2JLL6 359 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-203ENST00000468565 SP3Q02447 781 aa17.48■□□□□ 0.39
COL27A1-203ENST00000468565 PRRT2Q7Z6L0 340 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-203ENST00000468565 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
COL27A1-203ENST00000468565 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL27A1-203ENST00000468565 MYH8P13535 1937 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 TLR2O60603 784 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 ADD2P35612 726 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 FASTKD5Q7L8L6 764 aaKnown RBP17.47■□□□□ 0.39
COL27A1-203ENST00000468565 SAP30BPQ9UHR5 308 aaKnown RBP17.47■□□□□ 0.39
COL27A1-203ENST00000468565 BAZ2AQ9UIF9 1905 aaKnown RBP17.47■□□□□ 0.39
COL27A1-203ENST00000468565 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-203ENST00000468565 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 DNAJC18Q9H819 358 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 GINM1Q9NU53 330 aa17.47■□□□□ 0.39
COL27A1-203ENST00000468565 CCDC85CA6NKD9 419 aa17.46■□□□□ 0.39
COL27A1-203ENST00000468565 PDHXO00330 501 aa17.46■□□□□ 0.39
COL27A1-203ENST00000468565 PDE4AP27815 886 aa17.46■□□□□ 0.39
COL27A1-203ENST00000468565 RRP1BQ14684 758 aaKnown RBP17.46■□□□□ 0.39
COL27A1-203ENST00000468565 FBXO46Q6PJ61 603 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-203ENST00000468565 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
COL27A1-203ENST00000468565 EHD4Q9H223 541 aa17.46■□□□□ 0.39
COL27A1-203ENST00000468565 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 GPAT2Q6NUI2 795 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-203ENST00000468565 SLC45A1Q9Y2W3 748 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 MGAMO43451 1857 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 ASNSP08243 561 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-203ENST00000468565 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
COL27A1-203ENST00000468565 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 OTOP1Q7RTM1 612 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
COL27A1-203ENST00000468565 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 TRIM17Q9Y577 477 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
COL27A1-203ENST00000468565 ADGRA2Q96PE1 1338 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms