RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HHIPL2Q6UWX4 724 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 MTMR7Q9Y216 660 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 MINDY4BA8MYZ0 360 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 BRD1O95696 1058 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 LDHCP07864 332 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 HSP90AA1P07900 732 aaKnown RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 SEC23AQ15436 765 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 DALRD3Q5D0E6 543 aaKnown RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 GREB1LQ9C091 1923 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 SMARCC2Q8TAQ2 1214 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 ZDHHC15Q96MV8 337 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 FAM217BQ9NTX9 383 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-208ENST00000468300 ARPP21Q9UBL0 812 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-208ENST00000468300 NID2Q14112 1375 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 JAK2O60674 1132 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 SBF1O95248 1867 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 BAG3O95817 575 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 VIL1P09327 827 aaKnown RBP9.73□□□□□ -0.85
BRCA1-208ENST00000468300 CDC42EP5Q6NZY7 148 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 SGMS1Q86VZ5 419 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 MAPKAPK5Q8IW41 473 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 CHAMP1Q96JM3 812 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 CNNM2Q9H8M5 875 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 NCOA5Q9HCD5 579 aaKnown RBP9.73□□□□□ -0.85
BRCA1-208ENST00000468300 ORC4O43929 436 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 GJB2P29033 226 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 CRKP46108 304 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 DYNLL2Q96FJ2 89 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 KRT23Q9C075 422 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
BRCA1-208ENST00000468300 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
BRCA1-208ENST00000468300 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 PRDM1O75626 825 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 RALYLQ86SE5 291 aaKnown RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 KIAA0825Q8IV33 1275 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 NSUN7Q8NE18 718 aaKnown RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 ZKSCAN3Q9BRR0 538 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 PSMD14O00487 310 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 FDPSP14324 419 aaKnown RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 SYT1P21579 422 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 IARSP41252 1262 aaKnown RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 LIFRP42702 1097 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 ZFPM1Q8IX07 1006 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-208ENST00000468300 MYH15Q9Y2K3 1946 aa9.72□□□□□ -0.85
BRCA1-208ENST00000468300 HDLBPQ00341 1268 aaKnown RBP9.71□□□□□ -0.85
BRCA1-208ENST00000468300 NFIAQ12857 509 aa9.71□□□□□ -0.85
BRCA1-208ENST00000468300 SOGA3Q5TF21 947 aa9.71□□□□□ -0.85
BRCA1-208ENST00000468300 TEX11Q8IYF3 940 aa9.71□□□□□ -0.85
BRCA1-208ENST00000468300 SAP30BPQ9UHR5 308 aaKnown RBP9.71□□□□□ -0.85
BRCA1-208ENST00000468300 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.85
BRCA1-208ENST00000468300 NMT2O60551 498 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 CDC27P30260 824 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 USP5P45974 858 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 CCT2P78371 535 aaKnown RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 APOA5Q6Q788 366 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 SLF2Q8IX21 1173 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 SLC44A5Q8NCS7 719 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 MTA3Q9BTC8 594 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 IL17RBQ9NRM6 502 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 SERPINA10Q9UK55 444 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 MYH8P13535 1937 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 G3V3G9 751 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 RAD17O75943 681 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 PCP11498 1178 aaKnown RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 GABPAQ06546 454 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 TRDNQ13061 729 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 RCSD1Q6JBY9 416 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 RSBN1LQ6PCB5 846 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 RAB11FIP4Q86YS3 637 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 ENAHQ8N8S7 591 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 TEKT1Q969V4 418 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 RNF41Q9H4P4 317 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 PPP1R1BQ9UD71 204 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-208ENST00000468300 FAM198AQ9UFP1 575 aa9.71□□□□□ -0.86
BRCA1-208ENST00000468300 TCHHQ07283 1943 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 NUCB2P80303 420 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 RASSF7Q02833 373 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 NTRK3Q16288 839 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 RRP12Q5JTH9 1297 aaKnown RBP9.7□□□□□ -0.86
BRCA1-208ENST00000468300 C16orf86Q6ZW13 317 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 LARGE2Q8N3Y3 721 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 USP40Q9NVE5 1235 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 ZNRF3Q9ULT6 936 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 MTMR6Q9Y217 621 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-208ENST00000468300 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 PLCG2P16885 1265 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 CXCL9Q07325 125 aa9.7□□□□□ -0.86
BRCA1-208ENST00000468300 LLPHQ9BRT6 129 aaKnown RBP9.7□□□□□ -0.86
BRCA1-208ENST00000468300 MYL10Q9BUA6 226 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms