RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CYP2D6P10635 497 aa18.1■□□□□ 0.49
SNIP1-202ENST00000468040 PPARAQ07869 468 aa18.1■□□□□ 0.49
SNIP1-202ENST00000468040 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
SNIP1-202ENST00000468040 METTL16Q86W50 562 aaKnown RBP18.1■□□□□ 0.49
SNIP1-202ENST00000468040 RBM8AQ9Y5S9 174 aaKnown RBP18.1■□□□□ 0.49
SNIP1-202ENST00000468040 MAP3K10Q02779 954 aa18.09■□□□□ 0.49
SNIP1-202ENST00000468040 DLK2Q6UY11 383 aa18.09■□□□□ 0.49
SNIP1-202ENST00000468040 ZNF287Q9HBT7 754 aa18.09■□□□□ 0.49
SNIP1-202ENST00000468040 ANAPC4Q9UJX5 808 aa18.09■□□□□ 0.49
SNIP1-202ENST00000468040 SSC5DA1L4H1 1573 aa18.08■□□□□ 0.49
SNIP1-202ENST00000468040 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
SNIP1-202ENST00000468040 LAMA4Q16363 1823 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 CYP2D7A0A087X1C5 515 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 PPP1R12BO60237 982 aaPredicted RBP18.08■□□□□ 0.48
SNIP1-202ENST00000468040 GABPAQ06546 454 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNIP1-202ENST00000468040 SWAP70Q9UH65 585 aa18.08■□□□□ 0.48
SNIP1-202ENST00000468040 SIPA1L1O43166 1804 aa18.07■□□□□ 0.48
SNIP1-202ENST00000468040 PCP11498 1178 aaKnown RBP18.07■□□□□ 0.48
SNIP1-202ENST00000468040 FKBP1BP68106 108 aa18.07■□□□□ 0.48
SNIP1-202ENST00000468040 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
SNIP1-202ENST00000468040 MIGA2Q7L4E1 593 aa18.07■□□□□ 0.48
SNIP1-202ENST00000468040 ZNF341Q9BYN7 854 aa18.07■□□□□ 0.48
SNIP1-202ENST00000468040 CELF2O95319 508 aaKnown RBP18.06■□□□□ 0.48
SNIP1-202ENST00000468040 HAND2P61296 217 aa18.06■□□□□ 0.48
SNIP1-202ENST00000468040 PDE4BQ07343 736 aa18.06■□□□□ 0.48
SNIP1-202ENST00000468040 NECTIN1Q15223 517 aa18.06■□□□□ 0.48
SNIP1-202ENST00000468040 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
SNIP1-202ENST00000468040 TRPM7Q96QT4 1865 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 PAPPA2Q9BXP8 1791 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 CYP21A2P08686 494 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 MCCP23508 829 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 IREB2P48200 963 aaKnown RBP18.05■□□□□ 0.48
SNIP1-202ENST00000468040 EVX2Q03828 476 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNIP1-202ENST00000468040 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
SNIP1-202ENST00000468040 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 DYNLL2Q96FJ2 89 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 USP26Q9BXU7 913 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
SNIP1-202ENST00000468040 FAM196BA6NMK8 535 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
SNIP1-202ENST00000468040 HSPA4P34932 840 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 CDK8P49336 464 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 NT5C2P49902 561 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 CTDSPL2Q05D32 466 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 MAP3K11Q16584 847 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 AKNAD1Q5T1N1 836 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 MFSD6Q6ZSS7 791 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 C2orf69Q8N8R5 385 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 STAG1Q8WVM7 1258 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 KLRG1Q96E93 195 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
SNIP1-202ENST00000468040 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
SNIP1-202ENST00000468040 GBA2Q9HCG7 927 aaPredicted RBP18.04■□□□□ 0.48
SNIP1-202ENST00000468040 ANGEL1Q9UNK9 670 aaKnown RBP18.04■□□□□ 0.48
SNIP1-202ENST00000468040 SMIM22K7EJ46 135 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 SLC27A2O14975 620 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 USP2O75604 605 aaPredicted RBP18.03■□□□□ 0.48
SNIP1-202ENST00000468040 SEC24BO95487 1268 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 SHMT1P34896 483 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 PRKG1Q13976 671 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 CST9Q5W186 159 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 STK11IPQ8N1F8 1099 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 SLC44A5Q8NCS7 719 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNIP1-202ENST00000468040 WRNIP1Q96S55 665 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
SNIP1-202ENST00000468040 UNCXA6NJT0 531 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 PHF20L1A8MW92 1017 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 ORC4O43929 436 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 FGRP09769 529 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 SLURP2P0DP57 97 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
SNIP1-202ENST00000468040 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.48
SNIP1-202ENST00000468040 CCDC17Q96LX7 622 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
SNIP1-202ENST00000468040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNIP1-202ENST00000468040 CTNND1O60716 968 aaKnown RBP18.01■□□□□ 0.47
SNIP1-202ENST00000468040 MAP3K9P80192 1104 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 TRDNQ13061 729 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 KRT32Q14532 448 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 ANKRD13AQ8IZ07 590 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 KCNB2Q92953 911 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 KRT23Q9C075 422 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 TOMM22Q9NS69 142 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 GINM1Q9NU53 330 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 FZD1Q9UP38 647 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 CSADQ9Y600 493 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 MYH8P13535 1937 aa18.01■□□□□ 0.47
SNIP1-202ENST00000468040 TMEM88BA6NKF7 163 aa18■□□□□ 0.47
SNIP1-202ENST00000468040 PRDM1O75626 825 aa18■□□□□ 0.47
SNIP1-202ENST00000468040 RASA1P20936 1047 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms