RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TRIM60Q495X7 471 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 IFNLR1Q8IU57 520 aaPredicted RBP14.92□□□□□ -0.02
VPS26A-204ENST00000467852 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
VPS26A-204ENST00000467852 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 PI4K2BG5E9Z4 385 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 IGKV5-2P06315 115 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 CSF1RP07333 972 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 CNGA1P29973 690 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 RGS2P41220 211 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 EPHB4P54760 987 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 FPGSQ05932 587 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 SKIV2LQ15477 1246 aaKnown RBP14.91□□□□□ -0.02
VPS26A-204ENST00000467852 MICALL1Q8N3F8 863 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
VPS26A-204ENST00000467852 ARRDC4Q8NCT1 418 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 PLA2G12BQ9BX93 195 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 KCNH6Q9H252 994 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
VPS26A-204ENST00000467852 TACC3Q9Y6A5 838 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 MAST3O60307 1309 aa14.91□□□□□ -0.02
VPS26A-204ENST00000467852 PHIPQ8WWQ0 1821 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 KBTBD13C9JR72 458 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 H7C1W4 665 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 GYG1P46976 350 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 CCL14Q16627 93 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 MFSD14CQ5VZR4 134 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 CCAR1Q8IX12 1150 aaKnown RBP14.9□□□□□ -0.02
VPS26A-204ENST00000467852 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 PBX4Q9BYU1 374 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 MORF4L1Q9UBU8 362 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 ZDBF2Q9HCK1 2354 aa14.9□□□□□ -0.02
VPS26A-204ENST00000467852 MYBBP1AQ9BQG0 1328 aaKnown RBP14.9□□□□□ -0.02
VPS26A-204ENST00000467852 REV3LO60673 3130 aa14.89□□□□□ -0.03
VPS26A-204ENST00000467852 ERC2O15083 957 aa14.89□□□□□ -0.03
VPS26A-204ENST00000467852 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-204ENST00000467852 RAG1P15918 1043 aa14.89□□□□□ -0.03
VPS26A-204ENST00000467852 CHAF1AQ13111 956 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-204ENST00000467852 SNX17Q15036 470 aa14.89□□□□□ -0.03
VPS26A-204ENST00000467852 GJC2Q5T442 439 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-204ENST00000467852 HHIPL2Q6UWX4 724 aa14.89□□□□□ -0.03
VPS26A-204ENST00000467852 KHSRPQ92945 711 aaKnown RBP eCLIP14.89□□□□□ -0.034e-10■□□□□ 10
VPS26A-204ENST00000467852 FAM84BQ96KN1 310 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-204ENST00000467852 ST18O60284 1047 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 MAPK4P31152 587 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 PBX2P40425 430 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 IFIT5Q13325 482 aaKnown RBP14.88□□□□□ -0.03
VPS26A-204ENST00000467852 VPS37DQ86XT2 251 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 HERVK_113Q902F9 699 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 USP6NLQ92738 828 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 FBXL18Q96ME1 805 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 APBA2Q99767 749 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
VPS26A-204ENST00000467852 MSRAQ9UJ68 235 aa14.88□□□□□ -0.03
VPS26A-204ENST00000467852 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
VPS26A-204ENST00000467852 ITGB8P26012 769 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 UBE4AQ14139 1066 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 CWF19L2Q2TBE0 894 aaKnown RBP14.87□□□□□ -0.03
VPS26A-204ENST00000467852 C1orf53Q5VUE5 145 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 GPRC5AQ8NFJ5 357 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 CHD9Q3L8U1 2897 aa14.87□□□□□ -0.03
VPS26A-204ENST00000467852 NEURL1BA8MQ27 555 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 TLL1O43897 1013 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 CLTBP09497 229 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 TMPOP42166 694 aaKnown RBP14.86□□□□□ -0.03
VPS26A-204ENST00000467852 EVX2Q03828 476 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 TLE2Q04725 743 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 KSR2Q6VAB6 950 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 MIER1Q8N108 512 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 COG5Q9UP83 839 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 IQSEC3Q9UPP2 1182 aaPredicted RBP14.86□□□□□ -0.03
VPS26A-204ENST00000467852 SUGT1Q9Y2Z0 365 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 WDFY4Q6ZS81 3184 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
VPS26A-204ENST00000467852 PI4KAP2A4QPH2 592 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 GRXCR1A8MXD5 290 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 RAB30Q15771 203 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 MORN1Q5T089 497 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 CCDC174Q6PII3 467 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 PI4KAP1Q8N8J0 262 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
VPS26A-204ENST00000467852 CNNM1Q9NRU3 951 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 CHMP3Q9Y3E7 222 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 UTYO14607 1347 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
VPS26A-204ENST00000467852 KIAA0355O15063 1070 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 IRX3P78415 501 aaPredicted RBP14.84□□□□□ -0.03
VPS26A-204ENST00000467852 NFIAQ12857 509 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 GCKRQ14397 625 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 GPR142Q7Z601 462 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 PLEKHH3Q7Z736 793 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
VPS26A-204ENST00000467852 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
VPS26A-204ENST00000467852 SLC28A3Q9HAS3 691 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms