RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 HMMRO75330 724 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 BAG3O95817 575 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 RHBDL3P58872 404 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
SSR3-205ENST00000467789 TBC1D9Q6ZT07 1266 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
SSR3-205ENST00000467789 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
SSR3-205ENST00000467789 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
SSR3-205ENST00000467789 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 CXCL11O14625 94 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 TLR2O60603 784 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
SSR3-205ENST00000467789 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
SSR3-205ENST00000467789 IER5LQ5T953 404 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
SSR3-205ENST00000467789 ZFPM1Q8IX07 1006 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
SSR3-205ENST00000467789 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
SSR3-205ENST00000467789 DBNLQ9UJU6 430 aaKnown RBP12.67□□□□□ -0.38
SSR3-205ENST00000467789 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
SSR3-205ENST00000467789 BTBD19C9JJ37 291 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 CYP2E1P05181 493 aaPredicted RBP12.66□□□□□ -0.38
SSR3-205ENST00000467789 PPP4CP60510 307 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 PICALMQ13492 652 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 ANKRD23Q86SG2 305 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 FAM43AQ8N2R8 423 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
SSR3-205ENST00000467789 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
SSR3-205ENST00000467789 DDX4Q9NQI0 724 aaKnown RBP12.66□□□□□ -0.38
SSR3-205ENST00000467789 PICK1Q9NRD5 415 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 TRIM17Q9Y577 477 aa12.66□□□□□ -0.38
SSR3-205ENST00000467789 DOCK1Q14185 1865 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 GNRH1P01148 92 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
SSR3-205ENST00000467789 KIF1BPQ96EK5 621 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
SSR3-205ENST00000467789 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
SSR3-205ENST00000467789 EFCC1Q9HA90 598 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
SSR3-205ENST00000467789 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
SSR3-205ENST00000467789 FOCADQ5VW36 1801 aa12.65□□□□□ -0.39
SSR3-205ENST00000467789 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 PTPRAP18433 802 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 ZAP70P43403 619 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 KIF22Q14807 665 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
SSR3-205ENST00000467789 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
SSR3-205ENST00000467789 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
SSR3-205ENST00000467789 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
SSR3-205ENST00000467789 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
SSR3-205ENST00000467789 AACSQ86V21 672 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 TLR7Q9NYK1 1049 aaKnown RBP12.63□□□□□ -0.39
SSR3-205ENST00000467789 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 ZHX2Q9Y6X8 837 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
SSR3-205ENST00000467789 PTPRFP10586 1907 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
SSR3-205ENST00000467789 PDHXO00330 501 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 PRMT2P55345 433 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
SSR3-205ENST00000467789 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
SSR3-205ENST00000467789 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSR3-205ENST00000467789 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
SSR3-205ENST00000467789 GINM1Q9NU53 330 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSR3-205ENST00000467789 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 HTTP42858 3142 aa12.62□□□□□ -0.39
SSR3-205ENST00000467789 IDH1O75874 414 aaKnown RBP12.61□□□□□ -0.39
SSR3-205ENST00000467789 SOX10P56693 466 aa12.61□□□□□ -0.39
SSR3-205ENST00000467789 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
SSR3-205ENST00000467789 MOGSQ13724 837 aa12.61□□□□□ -0.39
SSR3-205ENST00000467789 C17orf99Q6UX52 265 aa12.61□□□□□ -0.39
SSR3-205ENST00000467789 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
SSR3-205ENST00000467789 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
SSR3-205ENST00000467789 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
SSR3-205ENST00000467789 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
SSR3-205ENST00000467789 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 IFIT2P09913 472 aaKnown RBP12.6□□□□□ -0.39
SSR3-205ENST00000467789 C7P10643 843 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 CYP7A1P22680 504 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 CAP2P40123 477 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
SSR3-205ENST00000467789 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms