RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 CNNM4Q6P4Q7 775 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 BHMTQ93088 406 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 MPHOSPH6Q99547 160 aaKnown RBP5.91□□□□□ -1.46
MSH2-205ENST00000467323 TARS2Q9BW92 718 aaKnown RBP5.91□□□□□ -1.46
MSH2-205ENST00000467323 ASPSCR1Q9BZE9 553 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 ZNF700Q9H0M5 742 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 ZIM2Q9NZV7 527 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 MARK1Q9P0L2 795 aa5.91□□□□□ -1.46
MSH2-205ENST00000467323 MRPS23Q9Y3D9 190 aaKnown RBP5.91□□□□□ -1.46
MSH2-205ENST00000467323 TRAV20A0A0B4J274 112 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 DCDC2BA2VCK2 349 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 GOLGA6CA6NDK9 693 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 GOLGA6BA6NDN3 693 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 SH3BP5O60239 455 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.46
MSH2-205ENST00000467323 KATNA1O75449 491 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 NPTXRO95502 500 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 EYA4O95677 639 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 GOLGA6DP0CG33 693 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 SMPD1P17405 629 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 RAB27AP51159 221 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 HNRNPUQ00839 825 aaKnown RBP eCLIP5.9□□□□□ -1.46
MSH2-205ENST00000467323 HSP90AA2PQ14568 343 aaPredicted RBP5.9□□□□□ -1.46
MSH2-205ENST00000467323 LRRC41Q15345 812 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 C6orf118Q5T5N4 469 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 NLRC3Q7RTR2 1065 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 WDR66Q8TBY9 1149 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 STK35Q8TDR2 534 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 EXOC2Q96KP1 924 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 POP1Q99575 1024 aaKnown RBP5.9□□□□□ -1.46
MSH2-205ENST00000467323 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.46
MSH2-205ENST00000467323 SLC5A4Q9NY91 659 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 GOLGA6AQ9NYA3 693 aa5.9□□□□□ -1.46
MSH2-205ENST00000467323 LTBP3Q9NS15 1303 aa5.9□□□□□ -1.47
MSH2-205ENST00000467323 TRBV23-1A0A0A0MS06 115 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 AKAP10O43572 662 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 BRINP1O60477 761 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 LDHAP00338 332 aaKnown RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 MAPTP10636 758 aaKnown RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 PTPRAP18433 802 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 ATP11AP98196 1134 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 TNP2Q05952 138 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 PTPN11Q06124 597 aaPredicted RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 PDE4BQ07343 736 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 ITKQ08881 620 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 ZYXQ15942 572 aaKnown RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 ZNF423Q2M1K9 1284 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 BBS9Q3SYG4 887 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 SV2CQ496J9 727 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 CDCP2Q5VXM1 449 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 FOXB2Q5VYV0 432 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 CEP135Q66GS9 1140 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 MAP1SQ66K74 1059 aaPredicted RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 OVOS1Q6IE37 1185 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 PASD1Q8IV76 773 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 SCUBE1Q8IWY4 988 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 DDX1Q92499 740 aaKnown RBP5.89□□□□□ -1.47
MSH2-205ENST00000467323 ATG4CQ96DT6 458 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 CNNM2Q9H8M5 875 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 BCCIPQ9P287 314 aaKnown RBP eCLIP5.89□□□□□ -1.47
MSH2-205ENST00000467323 PCDHB10Q9UN67 800 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 TACC3Q9Y6A5 838 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 SNCAIPQ9Y6H5 919 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 PHLDB1Q86UU1 1377 aa5.89□□□□□ -1.47
MSH2-205ENST00000467323 SLC22A31A6NKX4 558 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 J3QW42 95 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 GSTP1P09211 210 aaKnown RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 ACRP10323 421 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 SUMO1P63165 101 aaKnown RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 PIN1Q13526 163 aaPredicted RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 SCARF1Q14162 830 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 ZRSR2Q15696 482 aaKnown RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 FAM209AQ5JX71 171 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 WIPI1Q5MNZ9 446 aaPredicted RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 SYCP2LQ5T4T6 812 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 MRPL14Q6P1L8 145 aaKnown RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 ADAMTSL4Q6UY14 1074 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 HDXQ7Z353 690 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 C14orf80Q86SX3 495 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 PDZD3Q86UT5 571 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 MICALL1Q8N3F8 863 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 TTC8Q8TAM2 541 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 LEO1Q8WVC0 666 aaPredicted RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 KLHL6Q8WZ60 621 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 CHMP4CQ96CF2 233 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 MTMR8Q96EF0 704 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 ACSBG1Q96GR2 724 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 CLUHP3Q96NS8 147 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 CAMKK2Q96RR4 588 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 AARSD1Q9BTE6 412 aaKnown RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 TOR4AQ9NXH8 423 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 REV1Q9UBZ9 1251 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 ZNF214Q9UL59 606 aaPredicted RBP5.88□□□□□ -1.47
MSH2-205ENST00000467323 PCDHA4Q9UN74 947 aa5.88□□□□□ -1.47
MSH2-205ENST00000467323 SOX13Q9UN79 622 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms