RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SULF2Q8IWU5 870 aa8.36□□□□□ -1.07
XRN1-206ENST00000467077 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
XRN1-206ENST00000467077 FAM155AB1AL88 458 aaPredicted RBP8.35□□□□□ -1.07
XRN1-206ENST00000467077 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
XRN1-206ENST00000467077 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
XRN1-206ENST00000467077 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
XRN1-206ENST00000467077 NDUFB5O43674 189 aa8.34□□□□□ -1.07
XRN1-206ENST00000467077 MED14OSP0DP75 135 aa8.34□□□□□ -1.07
XRN1-206ENST00000467077 PDZD3Q86UT5 571 aa8.34□□□□□ -1.07
XRN1-206ENST00000467077 GLDCP23378 1020 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 ATP13A1Q9HD20 1204 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 C19orf73Q9NVV2 129 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
XRN1-206ENST00000467077 LINC00310P59036 64 aa8.32□□□□□ -1.08
XRN1-206ENST00000467077 CDC37L1Q7L3B6 337 aa8.32□□□□□ -1.08
XRN1-206ENST00000467077 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
XRN1-206ENST00000467077 HOXA5P20719 270 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 FCGRTP55899 365 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 GRM2Q14416 872 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 PPM1JQ5JR12 505 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 MFSD4AQ8N468 514 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 GPBAR1Q8TDU6 330 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 RELTQ969Z4 430 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 HSPA12BQ96MM6 686 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 SLC26A8Q96RN1 970 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 CBX8Q9HC52 389 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
XRN1-206ENST00000467077 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 ETV2O00321 342 aaPredicted RBP8.3□□□□□ -1.08
XRN1-206ENST00000467077 ARNTP27540 789 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 CDKAL1Q5VV42 579 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 KCT2Q8NC54 265 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 ALPK1Q96QP1 1244 aa8.3□□□□□ -1.08
XRN1-206ENST00000467077 SMG5Q9UPR3 1016 aaKnown RBP8.3□□□□□ -1.08
XRN1-206ENST00000467077 H3BRB1 525 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 H3BS24 57 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 EOMESO95936 686 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 KCNN1Q92952 543 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 TUT1Q9H6E5 874 aaKnown RBP8.29□□□□□ -1.08
XRN1-206ENST00000467077 SEMA3GQ9NS98 782 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 TPX2Q9ULW0 747 aaKnown RBP8.29□□□□□ -1.08
XRN1-206ENST00000467077 CSADQ9Y600 493 aa8.29□□□□□ -1.08
XRN1-206ENST00000467077 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
XRN1-206ENST00000467077 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
XRN1-206ENST00000467077 NME2P22392 152 aa8.28□□□□□ -1.08
XRN1-206ENST00000467077 ARMCX6Q7L4S7 300 aa8.28□□□□□ -1.08
XRN1-206ENST00000467077 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
XRN1-206ENST00000467077 SFRP5Q5T4F7 317 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 FAM129BQ96TA1 746 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 IRF2BPLQ9H1B7 796 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 KCNK12Q9HB15 430 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 SLAMF8Q9P0V8 285 aa8.27□□□□□ -1.09
XRN1-206ENST00000467077 DCDC2CA8MYV0 355 aa8.26□□□□□ -1.09
XRN1-206ENST00000467077 FANCGO15287 622 aa8.26□□□□□ -1.09
XRN1-206ENST00000467077 ICMTO60725 284 aa8.26□□□□□ -1.09
XRN1-206ENST00000467077 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
XRN1-206ENST00000467077 PARD6AQ9NPB6 346 aa8.26□□□□□ -1.09
XRN1-206ENST00000467077 LRIG2O94898 1065 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 NTF4P34130 210 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 ZBTB37Q5TC79 503 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 UBE3DQ7Z6J8 389 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 TTC6Q86TZ1 520 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 ZCCHC4Q9H5U6 513 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 NLRP2Q9NX02 1062 aa8.25□□□□□ -1.09
XRN1-206ENST00000467077 FGD1P98174 961 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 THAP5Q7Z6K1 395 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 MYLIPQ8WY64 445 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 C20orf173Q96LM9 149 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 AKAP2Q9Y2D5 859 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 SAMM50Q9Y512 469 aa8.24□□□□□ -1.09
XRN1-206ENST00000467077 PRR33A8MZF0 331 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 SRFP11831 508 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 ZNF252P-AS1Q0IIN9 211 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 ZNF746Q6NUN9 644 aaPredicted RBP8.23□□□□□ -1.09
XRN1-206ENST00000467077 DBX2Q6ZNG2 339 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 C12orf40Q86WS4 652 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
XRN1-206ENST00000467077 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
XRN1-206ENST00000467077 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
XRN1-206ENST00000467077 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
XRN1-206ENST00000467077 MIPEPQ99797 713 aa8.22□□□□□ -1.09
XRN1-206ENST00000467077 NIF3L1Q9GZT8 377 aa8.22□□□□□ -1.09
XRN1-206ENST00000467077 TMEM59LQ9UK28 342 aa8.22□□□□□ -1.09
XRN1-206ENST00000467077 SLITRK5O94991 958 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 SYN1P17600 705 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 BMP7P18075 431 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 ZNF507Q8TCN5 953 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 ST14Q9Y5Y6 855 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 CAPN6Q9Y6Q1 641 aa8.21□□□□□ -1.1
XRN1-206ENST00000467077 GPR182O15218 404 aa8.2□□□□□ -1.1
XRN1-206ENST00000467077 FOXD2O60548 495 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms