RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 PCNX4Q63HM2 1172 aa7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 HEXIM2Q96MH2 286 aaKnown RBP7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 TNKS2Q9H2K2 1166 aa7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
CHMP2B-202ENST00000466696 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
CHMP2B-202ENST00000466696 RNASE1P07998 156 aaKnown RBP7.51□□□□□ -1.21
CHMP2B-202ENST00000466696 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
CHMP2B-202ENST00000466696 ELMO3Q96BJ8 720 aa7.51□□□□□ -1.21
CHMP2B-202ENST00000466696 MBNL3Q9NUK0 354 aaKnown RBP7.51□□□□□ -1.21
CHMP2B-202ENST00000466696 CELA3AP09093 270 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 USP17L7P0C7H9 530 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 CD96P40200 585 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 SV2BQ7L1I2 683 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 ZNF507Q8TCN5 953 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 ASB11Q8WXH4 323 aa7.5□□□□□ -1.21
CHMP2B-202ENST00000466696 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
CHMP2B-202ENST00000466696 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
CHMP2B-202ENST00000466696 RASIP1Q5U651 963 aa7.49□□□□□ -1.21
CHMP2B-202ENST00000466696 UBE3DQ7Z6J8 389 aa7.49□□□□□ -1.21
CHMP2B-202ENST00000466696 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
CHMP2B-202ENST00000466696 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 LRIG2O94898 1065 aa7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 P4HBP07237 508 aaKnown RBP7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 SLC23A3Q6PIS1 610 aa7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 HDXQ7Z353 690 aa7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 TTF2Q9UNY4 1162 aaKnown RBP7.48□□□□□ -1.21
CHMP2B-202ENST00000466696 EOMESO95936 686 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 FZD5Q13467 585 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 ARMCX6Q7L4S7 300 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 SPACA3Q8IXA5 215 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 LRRN4CLQ8ND94 238 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 FAM168AQ92567 244 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 PRDM5Q9NQX1 630 aaPredicted RBP7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 MAPK8IP1Q9UQF2 711 aa7.47□□□□□ -1.21
CHMP2B-202ENST00000466696 CARMIL2Q6F5E8 1435 aa7.46□□□□□ -1.21
CHMP2B-202ENST00000466696 PRAMEF27A3QJZ7 478 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 C8AP07357 584 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 EIF4BP23588 611 aaKnown RBP7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 GNA15P30679 374 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 CLCN7P51798 805 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 FGD1P98174 961 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 IKZF1Q13422 519 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 INPP5AQ14642 412 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 CYFIP1Q7L576 1253 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 SNCAIPQ9Y6H5 919 aa7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.46□□□□□ -1.22
CHMP2B-202ENST00000466696 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
CHMP2B-202ENST00000466696 TTBK2Q6IQ55 1244 aa7.45□□□□□ -1.22
CHMP2B-202ENST00000466696 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
CHMP2B-202ENST00000466696 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
CHMP2B-202ENST00000466696 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
CHMP2B-202ENST00000466696 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 LMNB1P20700 586 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 CAP2P40123 477 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 ZP2Q05996 745 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 MFSD2AQ8NA29 543 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
CHMP2B-202ENST00000466696 SLITRK5O94991 958 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 ETF1P62495 437 aaKnown RBP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 RPS26P62854 115 aaKnown RBP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 SLBPQ14493 270 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 CCDC85BQ15834 202 aaPredicted RBP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 HID1Q8IV36 788 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 FLAD1Q8NFF5 587 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 FBRSQ9HAH7 460 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 LMCD1Q9NZU5 365 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 PITPNM2Q9BZ72 1349 aa7.43□□□□□ -1.22
CHMP2B-202ENST00000466696 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.42□□□□□ -1.22
CHMP2B-202ENST00000466696 C22orf34Q6ZV56 151 aa7.42□□□□□ -1.22
CHMP2B-202ENST00000466696 PRDM7Q9NQW5 492 aa7.42□□□□□ -1.22
CHMP2B-202ENST00000466696 AK5Q9Y6K8 562 aa7.42□□□□□ -1.22
CHMP2B-202ENST00000466696 FAM155AB1AL88 458 aaPredicted RBP7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 FARP2O94887 1054 aaPredicted RBP7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 SFRP5Q5T4F7 317 aa7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 ZNF746Q6NUN9 644 aaPredicted RBP7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 MIPEPQ99797 713 aa7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 TACC3Q9Y6A5 838 aa7.41□□□□□ -1.22
CHMP2B-202ENST00000466696 ZNF865P0CJ78 1059 aaPredicted RBP7.4□□□□□ -1.22
CHMP2B-202ENST00000466696 JAG1P78504 1218 aa7.4□□□□□ -1.22
CHMP2B-202ENST00000466696 NKG7Q16617 165 aa7.4□□□□□ -1.22
CHMP2B-202ENST00000466696 ZNF648Q5T619 568 aaPredicted RBP7.4□□□□□ -1.22
CHMP2B-202ENST00000466696 MFSD4AQ8N468 514 aa7.4□□□□□ -1.22
CHMP2B-202ENST00000466696 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 GRK4P32298 578 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 LETMD1Q6P1Q0 360 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 ZSWIM9Q86XI8 627 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 COX4I2Q96KJ9 171 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 HSPA12BQ96MM6 686 aa7.39□□□□□ -1.23
CHMP2B-202ENST00000466696 FAM53CQ9NYF3 392 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms