RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 BRF1Q92994 677 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 TRIM34Q9BYJ4 488 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 SBF1O95248 1867 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 TCP10L2B9ZVM9 353 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 ORC4O43929 436 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 PRDM1O75626 825 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 PLCD1P51178 756 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 TOB2Q14106 344 aaPredicted RBP14.29□□□□□ -0.12
VPS16-206ENST00000466415 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 CRACR2BQ8N4Y2 399 aaPredicted RBP14.29□□□□□ -0.12
VPS16-206ENST00000466415 SPRYD3Q8NCJ5 442 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 TMX3Q96JJ7 454 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 TMEM87BQ96K49 555 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 INCENPQ9NQS7 918 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
VPS16-206ENST00000466415 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
VPS16-206ENST00000466415 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPS16-206ENST00000466415 MYH1P12882 1939 aa14.29□□□□□ -0.12
VPS16-206ENST00000466415 SHTN1A0MZ66 631 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 TSPY2A6NKD2 308 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 SMIM22K7EJ46 135 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 WNT10BO00744 389 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 IFIT3O14879 490 aaKnown RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 TNNI2P48788 182 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 ANTXR2P58335 489 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 EVX2Q03828 476 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 COL9A3Q14050 684 aaPredicted RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 IQCA1Q86XH1 822 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 SWAP70Q9UH65 585 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 ZC3H4Q9UPT8 1303 aaKnown RBP14.28□□□□□ -0.12
VPS16-206ENST00000466415 TACC3Q9Y6A5 838 aa14.28□□□□□ -0.12
VPS16-206ENST00000466415 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 SH2B2O14492 632 aaPredicted RBP14.27□□□□□ -0.13
VPS16-206ENST00000466415 FGRP09769 529 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 TNFAIP1Q13829 316 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 WTAPQ15007 396 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 NBPF9Q3BBW0 867 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 FKBP1CQ5VVH2 108 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 ZBED3Q96IU2 234 aaPredicted RBP14.27□□□□□ -0.13
VPS16-206ENST00000466415 MTA3Q9BTC8 594 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 ZSWIM5Q9P217 1185 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 SERPINB13Q9UIV8 391 aa14.27□□□□□ -0.13
VPS16-206ENST00000466415 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
VPS16-206ENST00000466415 CCDC69A6NI79 296 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 DDNO94850 711 aaPredicted RBP14.26□□□□□ -0.13
VPS16-206ENST00000466415 TSPY3P0CV98 308 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 TSPY8P0CW00 308 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 CDK8P49336 464 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 FBXL16Q8N461 479 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 SLC44A5Q8NCS7 719 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 ZKSCAN3Q9BRR0 538 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 AGXT2Q9BYV1 514 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 EHD4Q9H223 541 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 PI4KBQ9UBF8 816 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 TPCN1Q9ULQ1 816 aa14.26□□□□□ -0.13
VPS16-206ENST00000466415 ATRNL1Q5VV63 1379 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 TNKSO95271 1327 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 KLF18A0A0U1RQI7 1052 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 GOLGA8BA8MQT2 603 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 TFAP4Q01664 338 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 STK3Q13188 491 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 ME3Q16798 604 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 SYNE3Q6ZMZ3 975 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 CCDC83Q8IWF9 413 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 ZFPM1Q8IX07 1006 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 FAM151AQ8WW52 585 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
VPS16-206ENST00000466415 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
VPS16-206ENST00000466415 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
VPS16-206ENST00000466415 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
VPS16-206ENST00000466415 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
VPS16-206ENST00000466415 LARGE1O95461 756 aa14.24□□□□□ -0.13
VPS16-206ENST00000466415 RASA1P20936 1047 aa14.24□□□□□ -0.13
VPS16-206ENST00000466415 LIFRP42702 1097 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms