RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TRIM22Q8IYM9 498 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 CGNQ9P2M7 1197 aaKnown RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 PSDA5PKW4 1024 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 KIF2AO00139 706 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 ZSCAN20P17040 1043 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 GNAT2P19087 354 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 MDM2Q00987 491 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
LIMS2-212ENST00000466410 FANCLQ9NW38 375 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 NR5A1Q13285 461 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 PTPN21Q16825 1174 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 OLFM4Q6UX06 510 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 CRACR2BQ8N4Y2 399 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-212ENST00000466410 LRP2BPQ9P2M1 347 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 IQSEC3Q9UPP2 1182 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-212ENST00000466410 AHDC1Q5TGY3 1603 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-212ENST00000466410 KCNJ6P48051 423 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 CFAP100Q494V2 611 aa22.26■■□□□ 1.15
LIMS2-212ENST00000466410 FBXO2Q9UK22 296 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-212ENST00000466410 A0A0G2JS52 829 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 NUP133Q8WUM0 1156 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 COL22A1Q8NFW1 1626 aaPredicted RBP22.25■■□□□ 1.15
LIMS2-212ENST00000466410 ERICH2A1L162 156 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 TMEM232C9JQI7 657 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 DHX8Q14562 1220 aaKnown RBP22.25■■□□□ 1.15
LIMS2-212ENST00000466410 CCDC152Q4G0S7 254 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 FEZ1Q99689 392 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 FOXP1Q9H334 677 aaPredicted RBP22.25■■□□□ 1.15
LIMS2-212ENST00000466410 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 PCDHB6Q9Y5E3 794 aa22.25■■□□□ 1.15
LIMS2-212ENST00000466410 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 NRDCO43847 1150 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 PTPREP23469 700 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 IGHMBP2P38935 993 aaKnown RBP22.24■■□□□ 1.15
LIMS2-212ENST00000466410 CRKLP46109 303 aaKnown RBP22.24■■□□□ 1.15
LIMS2-212ENST00000466410 SYT10Q6XYQ8 523 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 ADGRA1Q86SQ6 560 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 PRDM4Q9UKN5 801 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 SMIM22K7EJ46 135 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 CBFA2T2O43439 604 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 DEXIO95424 95 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 ZNF654Q8IZM8 581 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 FANCBQ8NB91 859 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 OXER1Q8TDS5 423 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 SDR42E1Q8WUS8 393 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 ERO1AQ96HE7 468 aa22.24■■□□□ 1.15
LIMS2-212ENST00000466410 POLR2DO15514 142 aaKnown RBP22.23■■□□□ 1.15
LIMS2-212ENST00000466410 CAMTA2O94983 1202 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 CHRNDQ07001 517 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 PPARAQ07869 468 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 GOLGA8FQ08AF8 430 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 GOLGA8DPQ0D2H9 430 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 RILPL1Q5EBL4 403 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 SLU7O95391 586 aaKnown RBP22.23■■□□□ 1.15
LIMS2-212ENST00000466410 CYP7A1P22680 504 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 HSP90AA4PQ58FG1 418 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 VSTM4Q8IW00 320 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 MAN1B1Q9UKM7 699 aa22.23■■□□□ 1.15
LIMS2-212ENST00000466410 MINDY4BA8MYZ0 360 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 PRR29P0C7W0 189 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 ATP2B1P20020 1258 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 POSTNQ15063 836 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 INTS13Q9NVM9 706 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 SERTAD1Q9UHV2 236 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 ELF2Q15723 593 aa22.22■■□□□ 1.15
LIMS2-212ENST00000466410 RNF41Q9H4P4 317 aaPredicted RBP22.22■■□□□ 1.15
LIMS2-212ENST00000466410 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
LIMS2-212ENST00000466410 DOT1LQ8TEK3 1739 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 ADAMTS2O95450 1211 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 NTSR2O95665 410 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 ELOA2Q8IYF1 753 aaPredicted RBP22.21■■□□□ 1.15
LIMS2-212ENST00000466410 PKNOX2Q96KN3 472 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 UBAC1Q9BSL1 405 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 L2HGDHQ9H9P8 463 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 ABCF2Q9UG63 623 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 LTBP4Q8N2S1 1624 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 PARP10Q53GL7 1025 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 GRAMD1CQ8IYS0 662 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 TMX1Q9H3N1 280 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 OGFRQ9NZT2 677 aa22.21■■□□□ 1.15
LIMS2-212ENST00000466410 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 TOP1P11387 765 aaKnown RBP22.2■■□□□ 1.14
LIMS2-212ENST00000466410 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 KMT5BQ4FZB7 885 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 USP49Q70CQ1 688 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 PDILTQ8N807 584 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 MTA3Q9BTC8 594 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 CABP5Q9NP86 173 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 HOOK1Q9UJC3 728 aaKnown RBP22.2■■□□□ 1.14
LIMS2-212ENST00000466410 COL4A1P02462 1669 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 WTIPA6NIX2 430 aaPredicted RBP22.2■■□□□ 1.14
LIMS2-212ENST00000466410 FMR1Q06787 632 aaKnown RBP eCLIP22.2■■□□□ 1.14
LIMS2-212ENST00000466410 DMTNQ08495 405 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 SEC23AQ15436 765 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 ACSBG1Q96GR2 724 aa22.2■■□□□ 1.14
LIMS2-212ENST00000466410 WNK3Q9BYP7 1800 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms