RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	NRSN2	Q9GZP1	204 aa		7.89	□□□□□ -1.15
CACNA1C-223	ENST00000465278	DDX41	Q9UJV9	622 aa	Known RBP	7.89	□□□□□ -1.15
CACNA1C-223	ENST00000465278	COL16A1	Q07092	1604 aa	Predicted RBP	7.89	□□□□□ -1.15
CACNA1C-223	ENST00000465278	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LOC100289279	A0A1B0GTE1	492 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	FAM181B	A6NEQ2	426 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ALX3	O95076	343 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RLBP1	P12271	317 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ELN	P15502	786 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LIG1	P18858	919 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LMNB1	P20700	586 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	PTPN11	Q06124	597 aa	Predicted RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RAD51AP2	Q09MP3	1159 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	CAMK2G	Q13555	558 aa	Predicted RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	PDE3A	Q14432	1141 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	WDR89	Q96FK6	387 aa	Predicted RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ACBD3	Q9H3P7	528 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	CCDC86	Q9H6F5	360 aa	Known RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	CYP8B1	Q9UNU6	501 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	DNMT1	P26358	1616 aa	Known RBP	7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	BIVM-ERCC5	R4GMW8	1640 aa		7.88	□□□□□ -1.15
CACNA1C-223	ENST00000465278	SELP	P16109	830 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	PWP1	Q13610	501 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	SEPT6	Q14141	434 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LRRC14	Q15048	493 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LLGL2	Q6P1M3	1020 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	AGGF1	Q8N302	714 aa	eCLIP	7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	USP21	Q9UK80	565 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RERE	Q9P2R6	1566 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	AGL	P35573	1532 aa		7.87	□□□□□ -1.15
CACNA1C-223	ENST00000465278	JCAD	Q9P266	1359 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	IQGAP1	P46940	1657 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	EIF4A3	P38919	411 aa	Known RBP	7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	TNNI2	P48788	182 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ZNF252P-AS1	Q0IIN9	211 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	EXOSC6	Q5RKV6	272 aa	Known RBP	7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	FBXL19	Q6PCT2	694 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	KIAA1211	Q6ZU35	1233 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ACAD11	Q709F0	780 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ZNF654	Q8IZM8	581 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RAD18	Q9NS91	495 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ADAMTS1	Q9UHI8	967 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ADGB	Q8N7X0	1667 aa		7.86	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ZNF862	O60290	1169 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	EIF4EBP3	O60516	100 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	SPATA31C1	P0DKV0	1188 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RPS26	P62854	115 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	GOLM1	Q8NBJ4	401 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	GPBAR1	Q8TDU6	330 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	ACSBG1	Q96GR2	724 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RUSC1	Q9BVN2	902 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	MIR1-1HG	Q9H1L0	117 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	DEPDC5	O75140	1603 aa		7.85	□□□□□ -1.15
CACNA1C-223	ENST00000465278	APBA3	O96018	575 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	DRD2	P14416	443 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	LMNB2	Q03252	620 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	SNAP47	Q5SQN1	464 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	DCAF11	Q8TEB1	546 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	RHOV	Q96L33	236 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	SPON2	Q9BUD6	331 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	TGIF2	Q9GZN2	237 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	MRPL18	Q9H0U6	180 aa	Known RBP	7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	STK17A	Q9UEE5	414 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	PCDHA4	Q9UN74	947 aa		7.84	□□□□□ -1.15
CACNA1C-223	ENST00000465278	AOC2	O75106	756 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	F13A1	P00488	732 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CDK8	P49336	464 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	AKAP4	Q5JQC9	854 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	NUTM2G	Q5VZR2	741 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	C12orf50	Q8NA57	414 aa	Predicted RBP	7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	LENG1	Q96BZ8	264 aa	Predicted RBP	7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CCSER2	Q9H7U1	834 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CSAD	Q9Y600	493 aa		7.83	□□□□□ -1.16
CACNA1C-223	ENST00000465278		F8W735	103 aa	Predicted RBP	7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	TLR3	O15455	904 aa	Known RBP	7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	TRIM37	O94972	964 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GART	P22102	1010 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	IREB2	P48200	963 aa	Known RBP	7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	TRIM42	Q8IWZ5	723 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	FBXO27	Q8NI29	283 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	TMPRSS13	Q9BYE2	586 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	AKTIP	Q9H8T0	292 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CAPN10	Q9HC96	672 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CNTLN	Q9NXG0	1405 aa		7.82	□□□□□ -1.16
CACNA1C-223	ENST00000465278	UTRN	P46939	3433 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	KRBA1	A5PL33	1030 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	DCDC2C	A8MYV0	355 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	C9orf172	C9J069	976 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	SLFN14	P0C7P3	912 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	PAK2	Q13177	524 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	INPP5A	Q14642	412 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	C12orf40	Q86WS4	652 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	KIAA0825	Q8IV33	1275 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	TMEM130	Q8N3G9	435 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GAL3ST3	Q96A11	431 aa		7.81	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms