RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 PHKA2P46019 1235 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 DGKZQ13574 1117 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 SCARF1Q14162 830 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 CCDC93Q567U6 631 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 FAM26DQ5JW98 314 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 PRPF40BQ6NWY9 871 aaKnown RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 NBPF10Q6P3W6 841 aaKnown RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 LYSMD3Q7Z3D4 306 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 TRIM46Q7Z4K8 759 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 YTHDC1Q96MU7 727 aaKnown RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 NYXQ9GZU5 481 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 TMX4Q9H1E5 349 aaPredicted RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 ZDHHC3Q9NYG2 299 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 KLK14Q9P0G3 267 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 NIP7Q9Y221 180 aaKnown RBP eCLIP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 LTBP3Q9NS15 1303 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 KDM3BQ7LBC6 1761 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 IQCA1LA6NCM1 817 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 TTLL8A6PVC2 850 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 FAM177BA6PVY3 158 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 NFKBIEO00221 500 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 ZBTB39O15060 712 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 KCNQ3O43525 872 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 SRGNP10124 158 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 BMP1P13497 986 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 NPR1P16066 1061 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 PIP4K2AP48426 406 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-204ENST00000465167 DCTN1Q14203 1278 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 PKDCCQ504Y2 493 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 ALKBH2Q6NS38 261 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 AIDAQ96BJ3 306 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 USP16Q9Y5T5 823 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 UTRNP46939 3433 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 SLX4Q8IY92 1834 aa7.57□□□□□ -1.2
SSBP1-204ENST00000465167 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 NRG2O14511 850 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-204ENST00000465167 ALDH1B1P30837 517 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 ETFBKMTQ8IXQ9 262 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 RTKN2Q8IZC4 609 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 CRIPAKQ8N1N5 446 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 NGEFQ8N5V2 710 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 RPGRQ92834 1020 aaKnown RBP7.56□□□□□ -1.2
SSBP1-204ENST00000465167 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 ASB16Q96NS5 453 aa7.56□□□□□ -1.2
SSBP1-204ENST00000465167 SCN4AP35499 1836 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 NUP98P52948 1817 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 PRAMEF22A3QJZ6 481 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 AXIN1O15169 862 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 FZD6O60353 706 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 NFE2L2Q16236 605 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 RHPN1Q8TCX5 695 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 RBCK1Q9BYM8 510 aa7.55□□□□□ -1.2
SSBP1-204ENST00000465167 RRP7AQ9Y3A4 280 aaKnown RBP7.55□□□□□ -1.2
SSBP1-204ENST00000465167 MAP3K15Q6ZN16 1313 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 ERVV-1B6SEH8 477 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 NDUFB5O43674 189 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 MYL6BP14649 208 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 RHOQP17081 205 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 HTRA3P83110 453 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 AAMPQ13685 434 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 PPP1R42Q7Z4L9 355 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
SSBP1-204ENST00000465167 DNAJC5GQ8N7S2 189 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 TSPYL4Q9UJ04 414 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 BRPF3Q9ULD4 1205 aa7.54□□□□□ -1.2
SSBP1-204ENST00000465167 GPC6Q9Y625 555 aaPredicted RBP7.54□□□□□ -1.2
SSBP1-204ENST00000465167 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 RBM47A0AV96 593 aaKnown RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 DDNO94850 711 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 ATP4AP20648 1035 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 RALBP1Q15311 655 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 EAPPQ56P03 285 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 ATCAYQ86WG3 371 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 LDHDQ86WU2 507 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 RBM17Q96I25 401 aaKnown RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 MIS18AQ9NYP9 233 aa7.53□□□□□ -1.2
SSBP1-204ENST00000465167 IBTKQ9P2D0 1353 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 GOLGB1Q14789 3259 aaKnown RBP7.53□□□□□ -1.2
SSBP1-204ENST00000465167 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
SSBP1-204ENST00000465167 EIF2S2P20042 333 aaKnown RBP7.52□□□□□ -1.21
SSBP1-204ENST00000465167 GPTP24298 496 aa7.52□□□□□ -1.21
SSBP1-204ENST00000465167 MSX1P28360 303 aa7.52□□□□□ -1.21
SSBP1-204ENST00000465167 IARSP41252 1262 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms