RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MYRIPQ8NFW9 859 aa21.62■■□□□ 1.05
TSPAN4-210ENST00000464987 PPP6R2O75170 966 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 HPSEQ9Y251 543 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 ERICH2A1L162 156 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 RRP9O43818 475 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 SYKP43405 635 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 SART3Q15020 963 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 AMIGO3Q86WK7 504 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 ZNF654Q8IZM8 581 aa21.61■■□□□ 1.05
TSPAN4-210ENST00000464987 TNKSO95271 1327 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 MMP1P03956 469 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 TOB1P50616 345 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 SPECC1Q5M775 1068 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 FAM182BQ5T319 152 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 ZMYND15Q9H091 742 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 GNL3LQ9NVN8 582 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 PRDM1O75626 825 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 SEC23AQ15436 765 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 CAVIN4Q5BKX8 364 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 NOSTRINQ8IVI9 506 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 DIS3L2Q8IYB7 885 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 FANCBQ8NB91 859 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 C8orf37Q96NL8 207 aa21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-210ENST00000464987 DUOX1Q9NRD9 1551 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 DYNC1I1O14576 645 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 NR5A1Q13285 461 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 SLC51AQ86UW1 340 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 LRRC8AQ8IWT6 810 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 SHISA4Q96DD7 197 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 BAZ2BQ9UIF8 2168 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 NLRP12P59046 1061 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 GRIN1Q05586 938 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 FILIP1Q7Z7B0 1213 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 PRIMPOLQ96LW4 560 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 UBAC1Q9BSL1 405 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 TFCP2L1Q9NZI6 479 aa21.59■■□□□ 1.05
TSPAN4-210ENST00000464987 BTAF1O14981 1849 aa21.58■■□□□ 1.05
TSPAN4-210ENST00000464987 PNOCQ13519 176 aa21.58■■□□□ 1.05
TSPAN4-210ENST00000464987 RESP18Q5W5W9 173 aa21.58■■□□□ 1.05
TSPAN4-210ENST00000464987 OXER1Q8TDS5 423 aa21.58■■□□□ 1.05
TSPAN4-210ENST00000464987 ANAPC4Q9UJX5 808 aa21.58■■□□□ 1.05
TSPAN4-210ENST00000464987 CNTNAP4Q9C0A0 1308 aa21.58■■□□□ 1.04
TSPAN4-210ENST00000464987 ZRSR1Q15695 479 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 TRIM22Q8IYM9 498 aa21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 hCG_1642624A0A1W2PR95 340 aa21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 NCAPHQ15003 741 aa21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 SLC10A5Q5PT55 438 aa21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 ENAHQ8N8S7 591 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 JAG2Q9Y219 1238 aa21.57■■□□□ 1.04
TSPAN4-210ENST00000464987 DEXIO95424 95 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 RBM6P78332 1123 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 LONRF3Q496Y0 759 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 FBXO33Q7Z6M2 555 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 JMYQ8N9B5 988 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 WASF1Q92558 559 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 ESR2Q92731 530 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 C16orf45Q96MC5 204 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 RPS8P62241 208 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 NSUN4Q96CB9 384 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 TIGD1Q96MW7 591 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 BPIFA3Q9BQP9 254 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 NARFQ9UHQ1 456 aa21.56■■□□□ 1.04
TSPAN4-210ENST00000464987 FAM237AA0A1B0GTK4 181 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 FOXN1O15353 648 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 CTR9Q6PD62 1173 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 METTL16Q86W50 562 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 FOXP4Q8IVH2 680 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 NGLY1Q96IV0 654 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 PCDHB6Q9Y5E3 794 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 GNPATO15228 680 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 CUTAO60888 179 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 PRDX5P30044 214 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 MECOMQ03112 1051 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 NBPF5PQ86XG9 351 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 MTA3Q9BTC8 594 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 AATFQ9NY61 560 aaKnown RBP eCLIP21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 TUBE1Q9UJT0 475 aa21.55■■□□□ 1.04
TSPAN4-210ENST00000464987 DLEC1Q9Y238 1755 aa21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 ATP2B1P20020 1258 aa21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 NLRP3Q96P20 1036 aa21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 ZSCAN10Q96SZ4 725 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 XPO4Q9C0E2 1151 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 CCDC88AQ3V6T2 1871 aa21.54■■□□□ 1.04
TSPAN4-210ENST00000464987 FAM205CA6NFA0 338 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 USP17L12C9JPN9 530 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 USP17L21D6R901 530 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 SAFBQ15424 915 aaKnown RBP eCLIP21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 HSD3B7Q9H2F3 369 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 IFNKQ9P0W0 207 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 KCNH3Q9ULD8 1083 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms