RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 FAM168AQ92567 244 aa5.82□□□□□ -1.48
GARNL3-213ENST00000464616 SLC38A3Q99624 504 aa5.82□□□□□ -1.48
GARNL3-213ENST00000464616 PRDM5Q9NQX1 630 aaPredicted RBP5.82□□□□□ -1.48
GARNL3-213ENST00000464616 PAGE1O75459 146 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
GARNL3-213ENST00000464616 USP17L7P0C7H9 530 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 BMP6P22004 513 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 ETF1P62495 437 aaKnown RBP5.81□□□□□ -1.48
GARNL3-213ENST00000464616 FGD1P98174 961 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 ZP2Q05996 745 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 PCNX4Q63HM2 1172 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 SCARA3Q6AZY7 606 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 SLC23A3Q6PIS1 610 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 MPRIPQ6WCQ1 1025 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 KSR1Q8IVT5 923 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 POU5F2Q8N7G0 328 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 FRMD6Q96NE9 622 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 FOXQ1Q9C009 403 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 C12orf49Q9H741 205 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
GARNL3-213ENST00000464616 IGF2BP3O00425 579 aaKnown RBP eCLIP5.8□□□□□ -1.48
GARNL3-213ENST00000464616 FARP2O94887 1054 aaPredicted RBP5.8□□□□□ -1.48
GARNL3-213ENST00000464616 PAPLNO95428 1278 aa5.8□□□□□ -1.48
GARNL3-213ENST00000464616 LDHBP07195 334 aaKnown RBP5.8□□□□□ -1.48
GARNL3-213ENST00000464616 C8AP07357 584 aa5.8□□□□□ -1.48
GARNL3-213ENST00000464616 EIF4BP23588 611 aaKnown RBP5.8□□□□□ -1.48
GARNL3-213ENST00000464616 FMR1Q06787 632 aaKnown RBP eCLIP5.8□□□□□ -1.48
GARNL3-213ENST00000464616 ZBTB37Q5TC79 503 aa5.8□□□□□ -1.48
GARNL3-213ENST00000464616 OSBPL7Q9BZF2 842 aa5.8□□□□□ -1.48
GARNL3-213ENST00000464616 LRIG2O94898 1065 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 ARMCX6Q7L4S7 300 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 LRRN4CLQ8ND94 238 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 TMEM40Q8WWA1 233 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 SETDB2Q96T68 719 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
GARNL3-213ENST00000464616 PLAGL2Q9UPG8 496 aa5.79□□□□□ -1.48
GARNL3-213ENST00000464616 CELA3AP09093 270 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 CLCN7P51798 805 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 CCDC85BQ15834 202 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-213ENST00000464616 KCNMB1Q16558 191 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 SFRP5Q5T4F7 317 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 ZNF648Q5T619 568 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-213ENST00000464616 TTBK2Q6IQ55 1244 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 ZNF746Q6NUN9 644 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-213ENST00000464616 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 HEXIM2Q96MH2 286 aaKnown RBP5.78□□□□□ -1.48
GARNL3-213ENST00000464616 MIPEPQ99797 713 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 MAPK8IP1Q9UQF2 711 aa5.78□□□□□ -1.48
GARNL3-213ENST00000464616 CYP7A1P22680 504 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 AFMP43652 599 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 CDKAL1Q5VV42 579 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 MFSD2AQ8NA29 543 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 PLPPR2Q96GM1 343 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 TNKS2Q9H2K2 1166 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 FAM53CQ9NYF3 392 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 ADAMTS6Q9UKP5 1117 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 SNCAIPQ9Y6H5 919 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 U3KQE9 123 aa5.77□□□□□ -1.49
GARNL3-213ENST00000464616 LRRC10BA6NIK2 292 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 INPP5AQ14642 412 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 WIPI1Q5MNZ9 446 aaPredicted RBP5.76□□□□□ -1.49
GARNL3-213ENST00000464616 LRFN4Q6PJG9 635 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 MPZL3Q6UWV2 235 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 ZSWIM9Q86XI8 627 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 HID1Q8IV36 788 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 ANKRD24Q8TF21 1146 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 XAGE3Q8WTP9 111 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 WNT10AQ9GZT5 417 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 CACNA2D2Q9NY47 1150 aa5.76□□□□□ -1.49
GARNL3-213ENST00000464616 CBX7O95931 251 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 EOMESO95936 686 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 P4HBP07237 508 aaKnown RBP5.75□□□□□ -1.49
GARNL3-213ENST00000464616 GNA15P30679 374 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 RING1Q06587 406 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 UBE3DQ7Z6J8 389 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 WFDC3Q8IUB2 231 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 SPACA3Q8IXA5 215 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 MFSD4AQ8N468 514 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 CCDC120Q96HB5 630 aa5.75□□□□□ -1.49
GARNL3-213ENST00000464616 H3BS24 57 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 PRPF40AO75400 957 aaKnown RBP5.74□□□□□ -1.49
GARNL3-213ENST00000464616 NTF4P34130 210 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 PDE4BQ07343 736 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 ZNF124Q15973 351 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 MAP3K11Q16584 847 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 NKPD1Q17RQ9 610 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 EAPPQ56P03 285 aaPredicted RBP5.74□□□□□ -1.49
GARNL3-213ENST00000464616 NPAS4Q8IUM7 802 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 HSPA12BQ96MM6 686 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 MIR1-1HGQ9H1L0 117 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 CARS2Q9HA77 564 aaKnown RBP5.74□□□□□ -1.49
GARNL3-213ENST00000464616 LMCD1Q9NZU5 365 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
GARNL3-213ENST00000464616 SLITRK5O94991 958 aa5.73□□□□□ -1.49
GARNL3-213ENST00000464616 GRK4P32298 578 aa5.73□□□□□ -1.49
GARNL3-213ENST00000464616 MLANAQ16655 118 aa5.73□□□□□ -1.49
GARNL3-213ENST00000464616 RASIP1Q5U651 963 aa5.73□□□□□ -1.49
GARNL3-213ENST00000464616 LETMD1Q6P1Q0 360 aa5.73□□□□□ -1.49
GARNL3-213ENST00000464616 CYFIP1Q7L576 1253 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms