RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SPEF2Q9C093 1822 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 PI4KAP2A4QPH2 592 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 TAF5LO75529 589 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ZRANB2O95218 330 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ADH1CP00326 375 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 BMP1P13497 986 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 CPA1P15085 419 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 CASQ1P31415 396 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 MCMDC2Q4G0Z9 681 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 SYT10Q6XYQ8 523 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 SYNE3Q6ZMZ3 975 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 Q6ZUG5 572 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ELOA2Q8IYF1 753 aaPredicted RBP8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 CEP112Q8N8E3 955 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 PI4KAP1Q8N8J0 262 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 IQUBQ8NA54 791 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ENGASEQ8NFI3 743 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 HELLSQ9NRZ9 838 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 SH3TC1Q8TE82 1336 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
CLSTN1-204ENST00000464286 ADCY9O60503 1353 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 COL15A1P39059 1388 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 CCDC151A5D8V7 595 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 GRM8O00222 908 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 TADA3O75528 432 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 CDKL5O76039 1030 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 NBPF7P0C2Y1 421 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 TOP1P11387 765 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 GRM5P41594 1212 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 MYL5Q02045 173 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 PLEKHO1Q53GL0 409 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 HSP90B2PQ58FF3 399 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 CPLX2Q6PUV4 134 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 FMR1NBQ8N0W7 255 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 NGDNQ8NEJ9 315 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 DSCC1Q9BVC3 393 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 C1QTNF2Q9BXJ5 285 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 NAA15Q9BXJ9 866 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 YY1AP1Q9H869 796 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 BRMS1Q9HCU9 246 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 NAP1L2Q9ULW6 460 aaPredicted RBP8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 DIP2BQ9P265 1576 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 WDR19Q8NEZ3 1342 aa8.26□□□□□ -1.09
CLSTN1-204ENST00000464286 TMEM2Q9UHN6 1383 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 FOXO3O43524 673 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 STX10O60499 249 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 IGSF3O75054 1194 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 SERPINC1P01008 464 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 TIMP2P16035 220 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 CMA1P23946 247 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 HNRNPH2P55795 449 aaKnown RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 EVCP57679 992 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 SMC1AQ14683 1233 aaKnown RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 AKAP4Q5JQC9 854 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 NBPF14Q5TI25 921 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 E4F1Q66K89 784 aaPredicted RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 HDXQ7Z353 690 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 IL17REQ8NFR9 667 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 FBXO18Q8NFZ0 1043 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 UTP14AQ9BVJ6 771 aaKnown RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 XPO4Q9C0E2 1151 aaKnown RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 ZNF446Q9NWS9 450 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 IFNKQ9P0W0 207 aa8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.25□□□□□ -1.09
CLSTN1-204ENST00000464286 ABCC6O95255 1503 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 USP27XA6NNY8 438 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 SPTLC2O15270 562 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 RPS6KA5O75582 802 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 EIF2S2P20042 333 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 HOXC9P31274 260 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 USP8P40818 1118 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 UBASH3AP57075 661 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 FANCCQ00597 558 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 STK3Q13188 491 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 ZSCAN26Q16670 478 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 KANK3Q6NY19 840 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 NSUN7Q8NE18 718 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 FAM227BQ96M60 508 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 FMNL2Q96PY5 1086 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 UBXN6Q9BZV1 441 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms