RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 ZNF213O14771 459 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 HAND2P61296 217 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 CTDSPL2Q05D32 466 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 FOXP4Q8IVH2 680 aaPredicted RBP16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 EHD4Q9H223 541 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 FGRP09769 529 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 IMMTQ16891 758 aaKnown RBP16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 CHADLQ6NUI6 762 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 RASEFQ8IZ41 740 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 CSRNP1Q96S65 589 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 DNAJC18Q9H819 358 aa16.52■□□□□ 0.23
PHACTR4-203ENST00000463428 SSC5DA1L4H1 1573 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 TBC1D12O60347 775 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHACTR4-203ENST00000463428 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 STOX1Q6ZVD7 989 aa16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 SLC44A5Q8NCS7 719 aa16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 STAG1Q8WVM7 1258 aa16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
PHACTR4-203ENST00000463428 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 TRAF5O00463 557 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 CDK8P49336 464 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 HERC5Q9UII4 1024 aaKnown RBP16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 MYH8P13535 1937 aa16.49■□□□□ 0.23
PHACTR4-203ENST00000463428 E7EWF7 191 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 SHMT1P34896 483 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
PHACTR4-203ENST00000463428 ORC4O43929 436 aa16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 TOMM70O94826 608 aa16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 COL9A3Q14050 684 aaPredicted RBP16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 ADCK5Q3MIX3 580 aa16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 TRPM7Q96QT4 1865 aa16.47■□□□□ 0.23
PHACTR4-203ENST00000463428 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 USP2O75604 605 aaPredicted RBP16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 RASA1P20936 1047 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 MCCP23508 829 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 ANAPC15P60006 121 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 PDE4BQ07343 736 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 CRACR2BQ8N4Y2 399 aaPredicted RBP16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 HOOK2Q96ED9 719 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 TBC1D32Q96NH3 1257 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 FZD1Q9UP38 647 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 NEDD4P46934 1319 aa16.46■□□□□ 0.23
PHACTR4-203ENST00000463428 PRDM1O75626 825 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 KIF2CQ99661 725 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 PAPPA2Q9BXP8 1791 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 JAG1P78504 1218 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 ZNF341Q9BYN7 854 aa16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
PHACTR4-203ENST00000463428 KRT32Q14532 448 aa16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 CST9Q5W186 159 aa16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
PHACTR4-203ENST00000463428 B4E1Z4 1266 aa16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 NF2P35240 595 aa16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
PHACTR4-203ENST00000463428 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms