RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 NME2P22392 152 aa7.34□□□□□ -1.23
USH2A-203ENST00000463147 C1QL4Q86Z23 238 aa7.34□□□□□ -1.23
USH2A-203ENST00000463147 CCER1Q8TC90 406 aaPredicted RBP7.34□□□□□ -1.23
USH2A-203ENST00000463147 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
USH2A-203ENST00000463147 DMRTB1Q96MA1 342 aa7.34□□□□□ -1.23
USH2A-203ENST00000463147 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
USH2A-203ENST00000463147 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
USH2A-203ENST00000463147 GDNFP39905 211 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 FCGRTP55899 365 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 CDC37L1Q7L3B6 337 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 NPM2Q86SE8 214 aaKnown RBP7.33□□□□□ -1.24
USH2A-203ENST00000463147 NPAS4Q8IUM7 802 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 TMC1Q8TDI8 760 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 PRDM5Q9NQX1 630 aaPredicted RBP7.33□□□□□ -1.24
USH2A-203ENST00000463147 PICK1Q9NRD5 415 aa7.33□□□□□ -1.24
USH2A-203ENST00000463147 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.32□□□□□ -1.24
USH2A-203ENST00000463147 FANCGO15287 622 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 ARHGAP4P98171 946 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 NKPD1Q17RQ9 610 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 MAP1SQ66K74 1059 aaPredicted RBP7.32□□□□□ -1.24
USH2A-203ENST00000463147 SCARA3Q6AZY7 606 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 ALKBH8Q96BT7 664 aaKnown RBP7.32□□□□□ -1.24
USH2A-203ENST00000463147 CSRNP1Q96S65 589 aa7.32□□□□□ -1.24
USH2A-203ENST00000463147 NCANO14594 1321 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 PRRG2O14669 202 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 PRR23BQ6ZRT6 265 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 LCNL1Q6ZST4 164 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 AMIGO3Q86WK7 504 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
USH2A-203ENST00000463147 B8ZZF3 427 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 ZNF252P-AS1Q0IIN9 211 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 ECM1Q16610 540 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 CACNA2D2Q9NY47 1150 aa7.3□□□□□ -1.24
USH2A-203ENST00000463147 FAM155AB1AL88 458 aaPredicted RBP7.29□□□□□ -1.24
USH2A-203ENST00000463147 TRIM37O94972 964 aa7.29□□□□□ -1.24
USH2A-203ENST00000463147 FYB2Q5VWT5 728 aa7.29□□□□□ -1.24
USH2A-203ENST00000463147 TTLL10Q6ZVT0 673 aa7.29□□□□□ -1.24
USH2A-203ENST00000463147 CARS2Q9HA77 564 aaKnown RBP7.29□□□□□ -1.24
USH2A-203ENST00000463147 CBX8Q9HC52 389 aa7.29□□□□□ -1.24
USH2A-203ENST00000463147 GPR182O15218 404 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 LRIG2O94898 1065 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 C1QTNF9P0C862 333 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 RAC2P15153 192 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 PPM1JQ5JR12 505 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 EPS8L3Q8TE67 593 aaKnown RBP7.28□□□□□ -1.24
USH2A-203ENST00000463147 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 AKAP2Q9Y2D5 859 aa7.28□□□□□ -1.24
USH2A-203ENST00000463147 EOMESO95936 686 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 RING1Q06587 406 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 LRRC14Q15048 493 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 ZNF746Q6NUN9 644 aaPredicted RBP7.27□□□□□ -1.25
USH2A-203ENST00000463147 THAP5Q7Z6K1 395 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 ZNF507Q8TCN5 953 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 COX4I2Q96KJ9 171 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 BCO2Q9BYV7 579 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 CEP44Q9C0F1 390 aa7.27□□□□□ -1.25
USH2A-203ENST00000463147 NSUN3Q9H649 340 aaKnown RBP7.27□□□□□ -1.25
USH2A-203ENST00000463147 IGHA2P01877 340 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 SFRP5Q5T4F7 317 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 ZBTB37Q5TC79 503 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 CIAPIN1Q6FI81 312 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 MFSD4AQ8N468 514 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 STK35Q8TDR2 534 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 RBCK1Q9BYM8 510 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 SEMA3GQ9NS98 782 aa7.26□□□□□ -1.25
USH2A-203ENST00000463147 TCAF2A6NFQ2 919 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 NTF4P34130 210 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
USH2A-203ENST00000463147 SERPINB4P48594 390 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 AEBP1Q8IUX7 1158 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 HSPA12BQ96MM6 686 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 NECAB3Q96P71 396 aaPredicted RBP7.25□□□□□ -1.25
USH2A-203ENST00000463147 EPB41L4BQ9H329 900 aa7.25□□□□□ -1.25
USH2A-203ENST00000463147 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
USH2A-203ENST00000463147 TPX2Q9ULW0 747 aaKnown RBP7.25□□□□□ -1.25
USH2A-203ENST00000463147 KRT1P04264 644 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 GLDCP23378 1020 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 KCNA10Q16322 511 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 MFSD2AQ8NA29 543 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 ELMO3Q96BJ8 720 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 ALPK1Q96QP1 1244 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 SLC26A8Q96RN1 970 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 SRCIN1Q9C0H9 1055 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 ATP13A1Q9HD20 1204 aa7.24□□□□□ -1.25
USH2A-203ENST00000463147 CCDC9Q9Y3X0 531 aaKnown RBP7.24□□□□□ -1.25
USH2A-203ENST00000463147 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
USH2A-203ENST00000463147 C12orf40Q86WS4 652 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms