RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KCNA3P22001 575 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 GUCY1B3Q02153 619 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 WTAPQ15007 396 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 SH3RF3Q8TEJ3 882 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ESR2Q92731 530 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 SCN9AQ15858 1988 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 ERICH2A1L162 156 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 POLD1P28340 1107 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 BTDP43251 543 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 PODNQ7Z5L7 613 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 CCDC144CPQ8IYA2 1237 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-213ENST00000462730 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-213ENST00000462730 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 MYL10Q9BUA6 226 aa16.9■□□□□ 0.3
HDAC6-213ENST00000462730 CDC27P30260 824 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.3
HDAC6-213ENST00000462730 PPP4CP60510 307 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 SYNE3Q6ZMZ3 975 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 TTC6Q86TZ1 520 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.3
HDAC6-213ENST00000462730 UBAC1Q9BSL1 405 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 MXD3Q9BW11 206 aa16.89■□□□□ 0.3
HDAC6-213ENST00000462730 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.3
HDAC6-213ENST00000462730 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 GAKO14976 1311 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 ECE2O60344 883 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 CDKL5O76039 1030 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 AOC3Q16853 763 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
HDAC6-213ENST00000462730 SLF2Q8IX21 1173 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 C8orf76Q96K31 380 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-213ENST00000462730 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
HDAC6-213ENST00000462730 DDX60LQ5H9U9 1706 aaKnown RBP16.89■□□□□ 0.29
HDAC6-213ENST00000462730 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-213ENST00000462730 CYP2D6P10635 497 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 PCP11498 1178 aaKnown RBP16.88■□□□□ 0.29
HDAC6-213ENST00000462730 USP5P45974 858 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 EVX2Q03828 476 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-213ENST00000462730 ELP1O95163 1332 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 PRDM1O75626 825 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 FAM163AQ96GL9 167 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-213ENST00000462730 SPATA32Q96LK8 384 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDAC6-213ENST00000462730 NID2Q14112 1375 aa16.88■□□□□ 0.29
HDAC6-213ENST00000462730 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 TNKSO95271 1327 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 SYCE3A1L190 88 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 FGRP09769 529 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 FAM217BQ9NTX9 383 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 MCM9Q9NXL9 1143 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
HDAC6-213ENST00000462730 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 FOCADQ5VW36 1801 aa16.87■□□□□ 0.29
HDAC6-213ENST00000462730 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 PPIP5K2O43314 1243 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 TGFB2P61812 414 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-213ENST00000462730 ORC4O43929 436 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 SEC23AQ15436 765 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 RTN1Q16799 776 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 SLC4A8Q2Y0W8 1093 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 ZNF654Q8IZM8 581 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 PHKBQ93100 1093 aa16.86■□□□□ 0.29
HDAC6-213ENST00000462730 ZSCAN10Q96SZ4 725 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-213ENST00000462730 PSDA5PKW4 1024 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-213ENST00000462730 PLCG2P16885 1265 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-213ENST00000462730 RHBDL3P58872 404 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 NTRK3Q16288 839 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 CCDC183Q5T5S1 534 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 STRIP1Q5VSL9 837 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 RTKN2Q8IZC4 609 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 FBXO18Q8NFZ0 1043 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 ALG1Q9BT22 464 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
HDAC6-213ENST00000462730 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms