RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ESR2Q92731 530 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 VPS33BQ9H267 617 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 PSMD14O00487 310 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 RANBP6O60518 1105 aaKnown RBP17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 SMARCC2Q8TAQ2 1214 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 ZDHHC15Q96MV8 337 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 RXRAP19793 462 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 LIFRP42702 1097 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 SEC23AQ15436 765 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 SLC44A5Q8NCS7 719 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 MRIQ9BWK5 157 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 ECM29Q5VYK3 1845 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 PPFIA3O75145 1194 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 MCM4P33991 863 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 PICALMQ13492 652 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 FAM47AQ5JRC9 791 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 RSBN1LQ6PCB5 846 aaPredicted RBP17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 APOA5Q6Q788 366 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 MYL10Q9BUA6 226 aa17.62■□□□□ 0.41
RPRD1B-203ENST00000462548 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 HDLBPQ00341 1268 aaKnown RBP17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 NIM1KQ8IY84 436 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 GMLQ99445 158 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 SPON1Q9HCB6 807 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 ZNRF3Q9ULT6 936 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 TNKSO95271 1327 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 STX6O43752 255 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 PRELPP51888 382 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 NFIAQ12857 509 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 WTAPQ15007 396 aa17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
RPRD1B-203ENST00000462548 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 NMT2O60551 498 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 RASSF7Q02833 373 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 PDE4BQ07343 736 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 NFXL1Q6ZNB6 911 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 CLEC17AQ6ZS10 378 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 ENAHQ8N8S7 591 aaPredicted RBP17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 LLPHQ9BRT6 129 aaKnown RBP17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.419e-8■■□□□ 11.4
RPRD1B-203ENST00000462548 CACNB3P54284 484 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 ZSCAN10Q96SZ4 725 aaPredicted RBP17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
RPRD1B-203ENST00000462548 CDC27P30260 824 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 CXCL9Q07325 125 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 MICU3Q86XE3 530 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 ARFGEF1Q9Y6D6 1849 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 CFAP100Q494V2 611 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
RPRD1B-203ENST00000462548 CCDC69A6NI79 296 aa17.58■□□□□ 0.41
RPRD1B-203ENST00000462548 ZSCAN22P10073 491 aaPredicted RBP17.58■□□□□ 0.41
RPRD1B-203ENST00000462548 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.41
RPRD1B-203ENST00000462548 ADD1P35611 737 aaKnown RBP17.58■□□□□ 0.41
RPRD1B-203ENST00000462548 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.41
RPRD1B-203ENST00000462548 ERICH2A1L162 156 aa17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 ZBTB43O43298 467 aa17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 RASA1P20936 1047 aa17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 METAP2P50579 478 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 PRMT6Q96LA8 375 aaPredicted RBP17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 OSBPL5Q9H0X9 879 aaPredicted RBP17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.4
RPRD1B-203ENST00000462548 CDK8P49336 464 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 TFAP4Q01664 338 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 GBP4Q96PP9 640 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 MYO3BQ8WXR4 1341 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 CDC37L1Q7L3B6 337 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 MKNK2Q9HBH9 465 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 FAM198AQ9UFP1 575 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
RPRD1B-203ENST00000462548 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 TSPY2A6NKD2 308 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 GOLGA8AA7E2F4 631 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 SLURP2P0DP57 97 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 IQCA1Q86XH1 822 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 IL17RBQ9NRM6 502 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 NID2Q14112 1375 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 GABPAQ06546 454 aa17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms