RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 LRRC14Q15048 493 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 C12orf40Q86WS4 652 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 TNKS2Q9H2K2 1166 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 MBNL3Q9NUK0 354 aaKnown RBP9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 ADAMTS6Q9UKP5 1117 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 IVNS1ABPQ9Y6Y0 642 aa9.67□□□□□ -0.86
GPCPD1-203ENST00000462080 FANCGO15287 622 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 ATP2B2Q01814 1243 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 RASIP1Q5U651 963 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 UBE3DQ7Z6J8 389 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 ATG4DQ86TL0 474 aaPredicted RBP9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 PI4K2BQ8TCG2 481 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 GTF2IRD1Q9UHL9 959 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 EIF4G1Q04637 1599 aaKnown RBP9.66□□□□□ -0.86
GPCPD1-203ENST00000462080 ZBTB37Q5TC79 503 aa9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 ANGEL2Q5VTE6 544 aaKnown RBP9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 FAM214BQ7L5A3 538 aa9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 PCDHA4Q9UN74 947 aa9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
GPCPD1-203ENST00000462080 IGF2BP3O00425 579 aaKnown RBP eCLIP9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 C8AP07357 584 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 CELA3AP09093 270 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 C12orf49Q9H741 205 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 FAM8A1Q9UBU6 413 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 CYP8B1Q9UNU6 501 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 ERCC6Q03468 1493 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 CARMIL2Q6F5E8 1435 aa9.64□□□□□ -0.87
GPCPD1-203ENST00000462080 FZD5Q13467 585 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 PCNX4Q63HM2 1172 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 KCT2Q8NC54 265 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 TIMELESSQ9UNS1 1208 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 SHROOM4Q9ULL8 1493 aa9.63□□□□□ -0.87
GPCPD1-203ENST00000462080 USP17L7P0C7H9 530 aa9.62□□□□□ -0.87
GPCPD1-203ENST00000462080 KCNA1Q09470 495 aa9.62□□□□□ -0.87
GPCPD1-203ENST00000462080 LRRN4CLQ8ND94 238 aa9.62□□□□□ -0.87
GPCPD1-203ENST00000462080 ELMO3Q96BJ8 720 aa9.62□□□□□ -0.87
GPCPD1-203ENST00000462080 KRTAP4-8A0A0G2JLE6 195 aa9.61□□□□□ -0.87
GPCPD1-203ENST00000462080 SLC23A3Q6PIS1 610 aa9.61□□□□□ -0.87
GPCPD1-203ENST00000462080 SPACA3Q8IXA5 215 aa9.61□□□□□ -0.87
GPCPD1-203ENST00000462080 FAM168AQ92567 244 aa9.61□□□□□ -0.87
GPCPD1-203ENST00000462080 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
GPCPD1-203ENST00000462080 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
GPCPD1-203ENST00000462080 ASB11Q8WXH4 323 aa9.6□□□□□ -0.87
GPCPD1-203ENST00000462080 GNAT3A8MTJ3 354 aa9.59□□□□□ -0.87
GPCPD1-203ENST00000462080 EOMESO95936 686 aa9.59□□□□□ -0.87
GPCPD1-203ENST00000462080 JAG1P78504 1218 aa9.59□□□□□ -0.87
GPCPD1-203ENST00000462080 ZNF507Q8TCN5 953 aa9.59□□□□□ -0.87
GPCPD1-203ENST00000462080 PRDM5Q9NQX1 630 aaPredicted RBP9.59□□□□□ -0.87
GPCPD1-203ENST00000462080 PRAMEF27A3QJZ7 478 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 LRIG2O94898 1065 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 LDHBP07195 334 aaKnown RBP9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 IKZF1Q13422 519 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 INPP5AQ14642 412 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 NKPD1Q17RQ9 610 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 LRFN4Q6PJG9 635 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 TTF2Q9UNY4 1162 aaKnown RBP9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 MAPK8IP1Q9UQF2 711 aa9.58□□□□□ -0.88
GPCPD1-203ENST00000462080 CLCN7P51798 805 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 PTPN11Q06124 597 aaPredicted RBP9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 SV2BQ7L1I2 683 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 GAL3ST3Q96A11 431 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 PLPPR2Q96GM1 343 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 FRMD6Q96NE9 622 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 PRDM7Q9NQW5 492 aa9.57□□□□□ -0.88
GPCPD1-203ENST00000462080 ZNF648Q5T619 568 aaPredicted RBP9.56□□□□□ -0.88
GPCPD1-203ENST00000462080 CYFIP1Q7L576 1253 aa9.56□□□□□ -0.88
GPCPD1-203ENST00000462080 HDXQ7Z353 690 aa9.56□□□□□ -0.88
GPCPD1-203ENST00000462080 FLAD1Q8NFF5 587 aa9.56□□□□□ -0.88
GPCPD1-203ENST00000462080 PITPNM2Q9BZ72 1349 aa9.56□□□□□ -0.88
GPCPD1-203ENST00000462080 SLITRK5O94991 958 aa9.55□□□□□ -0.88
GPCPD1-203ENST00000462080 ZP2Q05996 745 aa9.55□□□□□ -0.88
GPCPD1-203ENST00000462080 TMEM40Q8WWA1 233 aa9.55□□□□□ -0.88
GPCPD1-203ENST00000462080 FBRSQ9HAH7 460 aa9.55□□□□□ -0.88
GPCPD1-203ENST00000462080 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
GPCPD1-203ENST00000462080 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.54□□□□□ -0.88
GPCPD1-203ENST00000462080 WNT10AQ9GZT5 417 aa9.54□□□□□ -0.88
GPCPD1-203ENST00000462080 GNA15P30679 374 aa9.53□□□□□ -0.88
GPCPD1-203ENST00000462080 SLBPQ14493 270 aaKnown RBP eCLIP9.53□□□□□ -0.88
GPCPD1-203ENST00000462080 WIPI1Q5MNZ9 446 aaPredicted RBP9.53□□□□□ -0.88
GPCPD1-203ENST00000462080 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
GPCPD1-203ENST00000462080 SNCAIPQ9Y6H5 919 aa9.53□□□□□ -0.88
GPCPD1-203ENST00000462080 CENPBP07199 599 aaPredicted RBP9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 CAP2P40123 477 aa9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 ETF1P62495 437 aaKnown RBP9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 NKG7Q16617 165 aa9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 MIPEPQ99797 713 aa9.52□□□□□ -0.89
GPCPD1-203ENST00000462080 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
GPCPD1-203ENST00000462080 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
GPCPD1-203ENST00000462080 ZSWIM9Q86XI8 627 aa9.51□□□□□ -0.89
GPCPD1-203ENST00000462080 MFSD2AQ8NA29 543 aa9.51□□□□□ -0.89
GPCPD1-203ENST00000462080 PRR33A8MZF0 331 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms