RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
LDB1-203ENST00000461873 LAMB1P07942 1786 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 RAB11FIP3O75154 756 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 OSBPP22059 807 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 FCGRTP55899 365 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 LACTBP83111 547 aaPredicted RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 SH3RF3Q8TEJ3 882 aaPredicted RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 DDX4Q9NQI0 724 aaKnown RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 DBNLQ9UJU6 430 aaKnown RBP10.78□□□□□ -0.68
LDB1-203ENST00000461873 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
LDB1-203ENST00000461873 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.69
LDB1-203ENST00000461873 PSMC4P43686 418 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 RHBDL3P58872 404 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 CCAR1Q8IX12 1150 aaKnown RBP10.77□□□□□ -0.69
LDB1-203ENST00000461873 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 MAGEB6Q8N7X4 407 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
LDB1-203ENST00000461873 DDRGK1Q96HY6 314 aa10.77□□□□□ -0.69
LDB1-203ENST00000461873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.77□□□□□ -0.69
LDB1-203ENST00000461873 A0A0G2JLL6 359 aaPredicted RBP10.76□□□□□ -0.69
LDB1-203ENST00000461873 USP17L5A8MUK1 530 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 PHF20L1A8MW92 1017 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 ASNSP08243 561 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 PPP4CP60510 307 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 PRRT2Q7Z6L0 340 aaPredicted RBP10.76□□□□□ -0.69
LDB1-203ENST00000461873 TTC6Q86TZ1 520 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 DNAJC2Q99543 621 aaKnown RBP10.76□□□□□ -0.69
LDB1-203ENST00000461873 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.694e-16■■■■■ 33.1
LDB1-203ENST00000461873 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
LDB1-203ENST00000461873 SLC45A1Q9Y2W3 748 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 AFG3L2Q9Y4W6 797 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 ATRNL1Q5VV63 1379 aa10.76□□□□□ -0.69
LDB1-203ENST00000461873 DOCK1Q14185 1865 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 FAM196BA6NMK8 535 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 POLR3DP05423 398 aaPredicted RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 CAP2P40123 477 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 UBXN2AP68543 259 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 IRX3P78415 501 aaPredicted RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 MAP3K10Q02779 954 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 SPP2Q13103 211 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 C17orf99Q6UX52 265 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 COA7Q96BR5 231 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 CABP5Q9NP86 173 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 PIH1D3Q9NQM4 214 aaKnown RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 GINM1Q9NU53 330 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 TLR7Q9NYK1 1049 aaKnown RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 SAP30BPQ9UHR5 308 aaKnown RBP10.75□□□□□ -0.69
LDB1-203ENST00000461873 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 PTCH2Q9Y6C5 1203 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
LDB1-203ENST00000461873 COL2A1P02458 1487 aaPredicted RBP10.74□□□□□ -0.69
LDB1-203ENST00000461873 MAGEB6P1A0A0J9YX57 407 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 TNPO2O14787 897 aaKnown RBP10.74□□□□□ -0.69
LDB1-203ENST00000461873 CYP2C8P10632 490 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 SLC9C2Q5TAH2 1124 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 ZSCAN25Q6NSZ9 544 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 PROCA1Q8NCQ7 364 aaPredicted RBP10.74□□□□□ -0.69
LDB1-203ENST00000461873 FEZ1Q99689 392 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 CRNKL1Q9BZJ0 848 aaKnown RBP10.74□□□□□ -0.69
LDB1-203ENST00000461873 LRRCC1Q9C099 1032 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 ZBTB40Q9NUA8 1239 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 PALD1Q9ULE6 856 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 AGTPBP1Q9UPW5 1226 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 FLT1P17948 1338 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 MYPNQ86TC9 1320 aa10.74□□□□□ -0.69
LDB1-203ENST00000461873 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 GOLIM4O00461 696 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 GCLCP48506 637 aaPredicted RBP10.73□□□□□ -0.69
LDB1-203ENST00000461873 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 ZNF384Q8TF68 577 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
LDB1-203ENST00000461873 ARMC5Q96C12 935 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 SRRDQ9UH36 339 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 RFX7Q2KHR2 1363 aa10.73□□□□□ -0.69
LDB1-203ENST00000461873 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
LDB1-203ENST00000461873 GRK4P32298 578 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 HMGCS2P54868 508 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 DYNLL1P63167 89 aaKnown RBP10.72□□□□□ -0.69
LDB1-203ENST00000461873 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 ARHGAP39Q9C0H5 1083 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 SERPINB13Q9UIV8 391 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms