RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 RFX1P22670 979 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 HOXC9P31274 260 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 DDR1Q08345 913 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 NBPF6Q5VWK0 638 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 C20orf204Q6ZNR8 217 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.6□□□□□ -1.19
SPTA1-202ENST00000461624 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
SPTA1-202ENST00000461624 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
SPTA1-202ENST00000461624 NBPF4Q96M43 638 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 EDC4Q6P2E9 1401 aaKnown RBP7.6□□□□□ -1.19
SPTA1-202ENST00000461624 FER1L6Q2WGJ9 1857 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 COL6A3P12111 3177 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 MAP3K19Q56UN5 1328 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 PCDH11XQ9BZA7 1347 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 PCDH11YQ9BZA8 1340 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 NFKBIEO00221 500 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 CHRNA5P30532 468 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 TRIM28Q13263 835 aaKnown RBP7.59□□□□□ -1.19
SPTA1-202ENST00000461624 DOC2BQ14184 412 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 RTN1Q16799 776 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 BHMTQ93088 406 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 C1orf115Q9H7X2 142 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 CEP290O15078 2479 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 NCAPD2Q15021 1401 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 SCN4AP35499 1836 aa7.59□□□□□ -1.19
SPTA1-202ENST00000461624 AFDNP55196 1824 aaKnown RBP7.59□□□□□ -1.19
SPTA1-202ENST00000461624 CASP8AP2Q9UKL3 1982 aa7.59□□□□□ -1.2
SPTA1-202ENST00000461624 LILRB5O75023 590 aa7.58□□□□□ -1.2
SPTA1-202ENST00000461624 IGFBP4P22692 258 aa7.58□□□□□ -1.2
SPTA1-202ENST00000461624 Q8N3U1 123 aa7.58□□□□□ -1.2
SPTA1-202ENST00000461624 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
SPTA1-202ENST00000461624 RTL1A6NKG5 1358 aa7.58□□□□□ -1.2
SPTA1-202ENST00000461624 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 PTK7Q13308 1070 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 USHBP1Q8N6Y0 703 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 UBE2OQ9C0C9 1292 aaKnown RBP7.57□□□□□ -1.2
SPTA1-202ENST00000461624 SEMA6BQ9H3T3 888 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 ASAP1Q9ULH1 1129 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
SPTA1-202ENST00000461624 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 SMG6Q86US8 1419 aaKnown RBP7.56□□□□□ -1.2
SPTA1-202ENST00000461624 ITGB7P26010 798 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 MAP2K1Q02750 393 aaPredicted RBP7.56□□□□□ -1.2
SPTA1-202ENST00000461624 TRAPPC3LQ5T215 181 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 ARID3AQ99856 593 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 MCOLN1Q9GZU1 580 aa7.56□□□□□ -1.2
SPTA1-202ENST00000461624 WDR33Q9C0J8 1336 aaKnown RBP7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L12C9JPN9 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L21D6R901 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 POLRMTO00411 1230 aaKnown RBP7.55□□□□□ -1.2
SPTA1-202ENST00000461624 EPB42P16452 691 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 DPYDQ12882 1025 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
SPTA1-202ENST00000461624 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
SPTA1-202ENST00000461624 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
SPTA1-202ENST00000461624 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 TRIOBPQ9H2D6 2365 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 RAB3GAP2Q9H2M9 1393 aa7.55□□□□□ -1.2
SPTA1-202ENST00000461624 ANKRD31Q8N7Z5 1873 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-202ENST00000461624 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 FBLN1P23142 703 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 CCINQ13939 588 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 ANKMY2Q8IV38 441 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 PNMA5Q96PV4 448 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 C11orf16Q9NQ32 467 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 ATG3Q9NT62 314 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
SPTA1-202ENST00000461624 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-202ENST00000461624 CENPFP49454 3210 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 COL11A2P13942 1736 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-202ENST00000461624 TJP1Q07157 1748 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 BRCA2P51587 3418 aa7.54□□□□□ -1.2
SPTA1-202ENST00000461624 USP42Q9H9J4 1324 aaKnown RBP7.53□□□□□ -1.2
SPTA1-202ENST00000461624 C9orf172C9J069 976 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 ELNP15502 786 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 TM4SF1P30408 202 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 RAC1P63000 192 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 TBC1D8BQ0IIM8 1120 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms