RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CEACAM5P06731 702 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 DAB2P98082 770 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 IFI16Q16666 785 aaKnown RBP7.78□□□□□ -1.16
UBA3-204ENST00000461522 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.78□□□□□ -1.16
UBA3-204ENST00000461522 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
UBA3-204ENST00000461522 HDXQ7Z353 690 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 FBXO33Q7Z6M2 555 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 FMNL2Q96PY5 1086 aa7.78□□□□□ -1.16
UBA3-204ENST00000461522 PRKCQQ04759 706 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 MEI1Q5TIA1 1274 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 AGMOQ6ZNB7 445 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 CDC37L1Q7L3B6 337 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 ZNF507Q8TCN5 953 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 VAV3Q9UKW4 847 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 SNCAIPQ9Y6H5 919 aa7.77□□□□□ -1.17
UBA3-204ENST00000461522 PRAMEF27A3QJZ7 478 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBA3-204ENST00000461522 CDK8P49336 464 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 LIG3P49916 1009 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 BNIP3Q12983 259 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
UBA3-204ENST00000461522 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 WNT10AQ9GZT5 417 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 TNKS2Q9H2K2 1166 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 PCDHB5Q9Y5E4 795 aa7.76□□□□□ -1.17
UBA3-204ENST00000461522 LRIG2O94898 1065 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 CAP2P40123 477 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 ST13P50502 369 aaKnown RBP7.75□□□□□ -1.17
UBA3-204ENST00000461522 PSMD2Q13200 908 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 SEPT6Q14141 434 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 SLBPQ14493 270 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBA3-204ENST00000461522 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 FBRSQ9HAH7 460 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 GTF2IRD1Q9UHL9 959 aa7.75□□□□□ -1.17
UBA3-204ENST00000461522 TMEM265A0A087WTH1 108 aa7.74□□□□□ -1.17
UBA3-204ENST00000461522 EOMESO95936 686 aa7.74□□□□□ -1.17
UBA3-204ENST00000461522 CTSHP09668 335 aa7.74□□□□□ -1.17
UBA3-204ENST00000461522 CD8BP10966 210 aa7.74□□□□□ -1.17
UBA3-204ENST00000461522 ITGB5P18084 799 aa7.74□□□□□ -1.17
UBA3-204ENST00000461522 GFRA2O00451 464 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 ITIH2P19823 946 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 FUT4P22083 530 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 PLCL1Q15111 1095 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 TAF1CQ15572 869 aaPredicted RBP7.73□□□□□ -1.17
UBA3-204ENST00000461522 MAP3K11Q16584 847 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
UBA3-204ENST00000461522 FOXQ1Q9C009 403 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 SNX11Q9Y5W9 270 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 TACC3Q9Y6A5 838 aa7.73□□□□□ -1.17
UBA3-204ENST00000461522 USP31Q70CQ4 1352 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 SLITRK5O94991 958 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 RLBP1P12271 317 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 TFE3P19532 575 aaPredicted RBP7.72□□□□□ -1.17
UBA3-204ENST00000461522 LMNB1P20700 586 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 CD96P40200 585 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
UBA3-204ENST00000461522 XPCQ01831 940 aaPredicted RBP7.72□□□□□ -1.17
UBA3-204ENST00000461522 NKG7Q16617 165 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 AOC3Q16853 763 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 SPACA3Q8IXA5 215 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
UBA3-204ENST00000461522 ERCC3P19447 782 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 NKPD1Q17RQ9 610 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 ZNF792Q3KQV3 632 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 HID1Q8IV36 788 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 MIR1-1HGQ9H1L0 117 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
UBA3-204ENST00000461522 MAPK8IP1Q9UQF2 711 aa7.71□□□□□ -1.18
UBA3-204ENST00000461522 JUNBP17275 347 aaPredicted RBP7.7□□□□□ -1.18
UBA3-204ENST00000461522 GRK4P32298 578 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 TXKP42681 527 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
UBA3-204ENST00000461522 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 MFSD2AQ8NA29 543 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
UBA3-204ENST00000461522 GZF1Q9H116 711 aaPredicted RBP7.7□□□□□ -1.18
UBA3-204ENST00000461522 CST3P01034 146 aaPredicted RBP7.69□□□□□ -1.18
UBA3-204ENST00000461522 TSNAXIP1Q2TAA8 658 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 C22orf34Q6ZV56 151 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 MIPEPQ99797 713 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 MBNL3Q9NUK0 354 aaKnown RBP7.69□□□□□ -1.18
UBA3-204ENST00000461522 ADAMTS6Q9UKP5 1117 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 TLR6Q9Y2C9 796 aa7.69□□□□□ -1.18
UBA3-204ENST00000461522 GNAT3A8MTJ3 354 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 SORBS3O60504 671 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 PAPLNO95428 1278 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 RNASE1P07998 156 aaKnown RBP7.68□□□□□ -1.18
UBA3-204ENST00000461522 CLCN7P51798 805 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 ANGEL2Q5VTE6 544 aaKnown RBP7.68□□□□□ -1.18
UBA3-204ENST00000461522 PRAMEF13Q5VWM6 474 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 GOLGA2P5Q9HBQ8 144 aa7.68□□□□□ -1.18
UBA3-204ENST00000461522 CNTNAP4Q9C0A0 1308 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms