RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 WRNIP1Q96S55 665 aa10.79□□□□□ -0.68
HDAC9-220ENST00000461409 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-220ENST00000461409 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-220ENST00000461409 DENND2AQ9ULE3 1009 aa10.79□□□□□ -0.68
HDAC9-220ENST00000461409 TRIM17Q9Y577 477 aa10.79□□□□□ -0.68
HDAC9-220ENST00000461409 LAMB1P07942 1786 aa10.79□□□□□ -0.68
HDAC9-220ENST00000461409 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 LDHBP07195 334 aaKnown RBP10.78□□□□□ -0.68
HDAC9-220ENST00000461409 ARHGEF6Q15052 776 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 CCL15Q16663 113 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 INTS3Q68E01 1043 aaKnown RBP10.78□□□□□ -0.68
HDAC9-220ENST00000461409 OTOP1Q7RTM1 612 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 ZGPATQ8N5A5 531 aaKnown RBP10.78□□□□□ -0.68
HDAC9-220ENST00000461409 MEIS3Q99687 375 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 PTPN18Q99952 460 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
HDAC9-220ENST00000461409 DAGLAQ9Y4D2 1042 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 PDE4DIPQ5VU43 2346 aa10.78□□□□□ -0.68
HDAC9-220ENST00000461409 OTOFQ9HC10 1997 aa10.77□□□□□ -0.68
HDAC9-220ENST00000461409 CETPP11597 493 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 SP3Q02447 781 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 SNAPC2Q13487 334 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 ERO1BQ86YB8 467 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 FAM151AQ8WW52 585 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 BRI3BPQ8WY22 251 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 ZNF341Q9BYN7 854 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 EFCC1Q9HA90 598 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 ZFYVE28Q9HCC9 887 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 ZCCHC17Q9NP64 241 aaKnown RBP10.77□□□□□ -0.69
HDAC9-220ENST00000461409 AKAP2Q9Y2D5 859 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 SNCAIPQ9Y6H5 919 aa10.77□□□□□ -0.69
HDAC9-220ENST00000461409 SRGAP3O43295 1099 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 RGS20O76081 388 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PRDX5P30044 214 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PHKA1P46020 1223 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PPIL2Q13356 520 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 MTX1Q13505 466 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 TAF1CQ15572 869 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-220ENST00000461409 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 SLF2Q8IX21 1173 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 CD99L2Q8TCZ2 262 aa10.76□□□□□ -0.69
HDAC9-220ENST00000461409 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PDS5AQ29RF7 1337 aaKnown RBP10.76□□□□□ -0.69
HDAC9-220ENST00000461409 PPATQ06203 517 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 TCP10Q12799 353 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 MVPQ14764 893 aaKnown RBP10.75□□□□□ -0.69
HDAC9-220ENST00000461409 SPTY2D1Q68D10 685 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-220ENST00000461409 CDC42EP5Q6NZY7 148 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 DZIP1Q86YF9 867 aaKnown RBP10.75□□□□□ -0.69
HDAC9-220ENST00000461409 ANKK1Q8NFD2 765 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 ZKSCAN4Q969J2 545 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-220ENST00000461409 USP40Q9NVE5 1235 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 PTPN22Q9Y2R2 807 aa10.75□□□□□ -0.69
HDAC9-220ENST00000461409 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 C3orf80F5H4A9 247 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 IRF6O14896 467 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 GNAI2P04899 355 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 TRIM27P14373 513 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 ADORA1P30542 326 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 ATF7IPQ6VMQ6 1270 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 MIGA2Q7L4E1 593 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
HDAC9-220ENST00000461409 CENPFP49454 3210 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 A0A1B0GUL7 405 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 TLR2O60603 784 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 TIMM10P62072 90 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 TFCP2Q12800 502 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 NFIAQ12857 509 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 KIF22Q14807 665 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
HDAC9-220ENST00000461409 PRPF38BQ5VTL8 546 aaKnown RBP10.73□□□□□ -0.69
HDAC9-220ENST00000461409 FRAT1Q92837 279 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-220ENST00000461409 ARMC5Q96C12 935 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 ABCF2Q9UG63 623 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 ZNF112Q9UJU3 913 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 GAKO14976 1311 aa10.73□□□□□ -0.69
HDAC9-220ENST00000461409 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 ENTPD3O75355 529 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 GNRH1P01148 92 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 INPP5BP32019 993 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 GORABQ5T7V8 394 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 NBPF11Q86T75 865 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-220ENST00000461409 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 IDI2Q9BXS1 227 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 KCNH4Q9UQ05 1017 aa10.72□□□□□ -0.69
HDAC9-220ENST00000461409 RGS3P49796 1198 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 GSTO1P78417 241 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDAC9-220ENST00000461409 SLC9C1Q4G0N8 1177 aa10.71□□□□□ -0.69
HDAC9-220ENST00000461409 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms