RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 GIMAP6Q6P9H5 292 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 OLFM4Q6UX06 510 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 CDC37L1Q7L3B6 337 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 DEFB132Q7Z7B7 95 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 MICU3Q86XE3 530 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 CCDC144CPQ8IYA2 1237 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 NSUN7Q8NE18 718 aaKnown RBP7.95□□□□□ -1.14
MSH2-204ENST00000461394 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 AGXT2Q9BYV1 514 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 COA1Q9GZY4 146 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 GDPD2Q9HCC8 539 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 ATP8A2Q9NTI2 1148 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 LMBRD1Q9NUN5 540 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 MCM9Q9NXL9 1143 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 ARPP21Q9UBL0 812 aaPredicted RBP7.95□□□□□ -1.14
MSH2-204ENST00000461394 BRPF3Q9ULD4 1205 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 SLC12A7Q9Y666 1083 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 MROH7-TTC4A0A0A0MT08 1334 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 MYH1P12882 1939 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 MYH6P13533 1939 aa7.95□□□□□ -1.14
MSH2-204ENST00000461394 SLX4Q8IY92 1834 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 USP17L12C9JPN9 530 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 USP17L21D6R901 530 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 IGSF3O75054 1194 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 PLCG2P16885 1265 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 RXRAP19793 462 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 BTDP43251 543 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 KRT85P78386 507 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 GUCY1B3Q02153 619 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 DNM1Q05193 864 aaKnown RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 PDE4BQ07343 736 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 GNL2Q13823 731 aaKnown RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 TRIM29Q14134 588 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 KLHL40Q2TBA0 621 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 L1TD1Q5T7N2 865 aaKnown RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 CTR9Q6PD62 1173 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 USP48Q86UV5 1035 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 IQCA1Q86XH1 822 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 TEX11Q8IYF3 940 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 SH3RF3Q8TEJ3 882 aaPredicted RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 ZNF384Q8TF68 577 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 NUP133Q8WUM0 1156 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 C8orf76Q96K31 380 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 ZSWIM5Q9P217 1185 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 ORC3Q9UBD5 711 aaPredicted RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 SAP30BPQ9UHR5 308 aaKnown RBP7.94□□□□□ -1.14
MSH2-204ENST00000461394 PCDHB8Q9UN66 801 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 DLEC1Q9Y238 1755 aa7.94□□□□□ -1.14
MSH2-204ENST00000461394 MYH8P13535 1937 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 GOLGA6L4A6NEF3 574 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 TSPY2A6NKD2 308 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 PRDM1O75626 825 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 CTDNEP1O95476 244 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 CYP2D6P10635 497 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
MSH2-204ENST00000461394 MFSD10Q14728 455 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 GRIK5Q16478 980 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 RTN1Q16799 776 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 IFIT1BQ5T764 474 aaKnown RBP7.93□□□□□ -1.14
MSH2-204ENST00000461394 CERS3Q8IU89 383 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 MAPKAPK5Q8IW41 473 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 TMTC2Q8N394 836 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 FBXL16Q8N461 479 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 FBXO22Q8NEZ5 403 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 TGFBRAP1Q8WUH2 860 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 MYL10Q9BUA6 226 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 ZSCAN16Q9H4T2 348 aaPredicted RBP7.93□□□□□ -1.14
MSH2-204ENST00000461394 DBNDD1Q9H9R9 158 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 LY9Q9HBG7 655 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 MKNK2Q9HBH9 465 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 DCP1AQ9NPI6 582 aaPredicted RBP7.93□□□□□ -1.14
MSH2-204ENST00000461394 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
MSH2-204ENST00000461394 ANAPC4Q9UJX5 808 aa7.93□□□□□ -1.14
MSH2-204ENST00000461394 USP17L8P0C7I0 530 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 PCP11498 1178 aaKnown RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 IARSP41252 1262 aaKnown RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 LIFRP42702 1097 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 EVCP57679 992 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 AKAP17AQ02040 695 aaKnown RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 PDE4DQ08499 809 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 APOA5Q6Q788 366 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 CATIPQ7Z7H3 387 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 TRIM22Q8IYM9 498 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 SUPT20HQ8NEM7 779 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 IGDCC4Q8TDY8 1250 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 SPATA32Q96LK8 384 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 ZSCAN10Q96SZ4 725 aaPredicted RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 ALG1Q9BT22 464 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 SLC26A6Q9BXS9 759 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 TSPYL2Q9H2G4 693 aaPredicted RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 TTF2Q9UNY4 1162 aaKnown RBP7.92□□□□□ -1.14
MSH2-204ENST00000461394 TACC3Q9Y6A5 838 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms