RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 MAPK8P45983 427 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 ATP2B2Q01814 1243 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 ZNF252P-AS1Q0IIN9 211 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 ENOX2Q16206 610 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 C12orf40Q86WS4 652 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 ZSWIM9Q86XI8 627 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 ZSCAN29Q8IWY8 852 aaPredicted RBP6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 TRAIPQ9BWF2 469 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 FOXQ1Q9C009 403 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 PPM1HQ9ULR3 514 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 CLCN7P51798 805 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 FAM84AQ96KN4 292 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 TNKS2Q9H2K2 1166 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 U3KQE9 123 aa6.34□□□□□ -1.39
SPTLC1-203ENST00000461132 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 GIPC1O14908 333 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 LMNB1P20700 586 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 AFMP43652 599 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 KCNA1Q09470 495 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 FLAD1Q8NFF5 587 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 HEXIM2Q96MH2 286 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 PODXL2Q9NZ53 605 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 CYP8B1Q9UNU6 501 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 SPG7Q9UQ90 795 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
SPTLC1-203ENST00000461132 TREHO43280 583 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 FBXO24O75426 580 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 MLANAQ16655 118 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 ZBTB37Q5TC79 503 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 SCARA3Q6AZY7 606 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 AEBP1Q8IUX7 1158 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 IVNS1ABPQ9Y6Y0 642 aa6.32□□□□□ -1.4
SPTLC1-203ENST00000461132 ENC1O14682 589 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 LRIG2O94898 1065 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 BMP6P22004 513 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 DSC3Q14574 896 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 ZNF746Q6NUN9 644 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 HDXQ7Z353 690 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 SPACA3Q8IXA5 215 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 PPP1R16BQ96T49 567 aa6.31□□□□□ -1.4
SPTLC1-203ENST00000461132 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 MPRIPQ6WCQ1 1025 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
SPTLC1-203ENST00000461132 PAGE1O75459 146 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 CDKAL1Q5VV42 579 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 CYFIP1Q7L576 1253 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 MFSD4AQ8N468 514 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 MFSD2AQ8NA29 543 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 TOX2Q96NM4 488 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 MIPEPQ99797 713 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
SPTLC1-203ENST00000461132 PITPNM2Q9BZ72 1349 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 EOMESO95936 686 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 CYP7A1P22680 504 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 TMEM67Q5HYA8 995 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 NPAS4Q8IUM7 802 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 KIRREL1Q96J84 757 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 CARS2Q9HA77 564 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 CTNND2Q9UQB3 1225 aa6.28□□□□□ -1.4
SPTLC1-203ENST00000461132 GLI1P08151 1106 aa6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 NTF4P34130 210 aa6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 RING1Q06587 406 aa6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 DIEXFQ68CQ4 756 aaKnown RBP6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 ZSCAN18Q8TBC5 510 aaPredicted RBP6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 HSPA12BQ96MM6 686 aa6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 C12orf49Q9H741 205 aa6.27□□□□□ -1.41
SPTLC1-203ENST00000461132 H3BS24 57 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 CELA3AP09093 270 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 USP17L7P0C7H9 530 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 UBE3DQ7Z6J8 389 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 OSBPL7Q9BZF2 842 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 SNCAIPQ9Y6H5 919 aa6.26□□□□□ -1.41
SPTLC1-203ENST00000461132 ARID1BQ8NFD5 2236 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 ZNF503-AS2A6NEH8 195 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 SLITRK5O94991 958 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 CBX7O95931 251 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 RAC2P15153 192 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms