RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 NOL9Q5SY16 702 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 TICAM2Q86XR7 235 aa24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 FOXP4Q8IVH2 680 aaPredicted RBP24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 SEC62Q99442 399 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 DNAJC18Q9H819 358 aa24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 HERC5Q9UII4 1024 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-210ENST00000460909 M0R2C6 588 aa24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 MAP2K1Q02750 393 aaPredicted RBP24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 MKRN3Q13064 507 aaKnown RBP24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 OPTNQ96CV9 577 aa24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 ATP8A2Q9NTI2 1148 aa24.81■■□□□ 1.56
RPUSD3-210ENST00000460909 BAZ2AQ9UIF9 1905 aaKnown RBP24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 SPDYE5A6NIY4 337 aa24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 TRIM6-TRIM34B2RNG4 842 aa24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 RRP1BQ14684 758 aaKnown RBP24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 SLC4A8Q2Y0W8 1093 aa24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 SLC4A4Q9Y6R1 1079 aa24.8■■□□□ 1.56
RPUSD3-210ENST00000460909 GPAA1O43292 621 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 HSPA1AP0DMV8 641 aaKnown RBP24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 HSPA1BP0DMV9 641 aaKnown RBP24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 PLCD1P51178 756 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 ERO1BQ86YB8 467 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 EHD4Q9H223 541 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 MCM9Q9NXL9 1143 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 DOCK1Q14185 1865 aa24.79■■□□□ 1.56
RPUSD3-210ENST00000460909 CTNND1O60716 968 aaKnown RBP24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 HLA-DOAP06340 250 aa24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 TM4SF4P48230 202 aa24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 EVX2Q03828 476 aa24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 REM2Q8IYK8 340 aaPredicted RBP24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 SCYL3Q8IZE3 742 aa24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 RILPL2Q969X0 211 aa24.78■■□□□ 1.56
RPUSD3-210ENST00000460909 GSG1L2A8MUP6 293 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 GSPT1P15170 499 aaKnown RBP24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 TTC22Q5TAA0 569 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 TTC6Q86TZ1 520 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 OTUD5Q96G74 571 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 CCDC136Q96JN2 1154 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 MS4A4AQ96JQ5 239 aa24.77■■□□□ 1.56
RPUSD3-210ENST00000460909 CRACR2BQ8N4Y2 399 aaPredicted RBP24.76■■□□□ 1.55
RPUSD3-210ENST00000460909 SERPINB13Q9UIV8 391 aa24.76■■□□□ 1.55
RPUSD3-210ENST00000460909 ATAD5Q96QE3 1844 aa24.76■■□□□ 1.55
RPUSD3-210ENST00000460909 PHIPQ8WWQ0 1821 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 POLR3DP05423 398 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 CYP2D6P10635 497 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 CAP2P40123 477 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 PPATQ06203 517 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 GABPAQ06546 454 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 PPIL2Q13356 520 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 ERICH6BQ5W0A0 696 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 FAM227BQ96M60 508 aa24.75■■□□□ 1.55
RPUSD3-210ENST00000460909 MANSC4A6NHS7 340 aaPredicted RBP24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 USP17L12C9JPN9 530 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 USP17L21D6R901 530 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 IRF6O14896 467 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 PTPRAP18433 802 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 GNAT2P19087 354 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 SDSP20132 328 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 JAG1P78504 1218 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 C12orf60Q5U649 245 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 TATDN1Q6P1N9 297 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 GIMAP6Q6P9H5 292 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 EPB41L4AQ9HCS5 686 aaPredicted RBP24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 HELLSQ9NRZ9 838 aa24.74■■□□□ 1.55
RPUSD3-210ENST00000460909 A0A0D9SFI3 127 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 TESPA1A2RU30 521 aaPredicted RBP24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 SMIM22K7EJ46 135 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 FOXN1O15353 648 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 INHBEP58166 350 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 SREBF2Q12772 1141 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 NMIQ13287 307 aaPredicted RBP24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 CTR9Q6PD62 1173 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 CCDC129Q6ZRS4 1044 aa24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.73■■□□□ 1.55
RPUSD3-210ENST00000460909 CYP2D7A0A087X1C5 515 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 PATL2C9JE40 543 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 FOXP2O15409 715 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 SHMT1P34896 483 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 TRIM34Q9BYJ4 488 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 PICK1Q9NRD5 415 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 RNF186Q9NXI6 227 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 KCNH4Q9UQ05 1017 aa24.72■■□□□ 1.55
RPUSD3-210ENST00000460909 SHROOM1Q2M3G4 852 aaPredicted RBP24.71■■□□□ 1.55
RPUSD3-210ENST00000460909 SBK1Q52WX2 424 aa24.71■■□□□ 1.55
RPUSD3-210ENST00000460909 DDRGK1Q96HY6 314 aa24.71■■□□□ 1.55
RPUSD3-210ENST00000460909 PTPN18Q99952 460 aa24.71■■□□□ 1.55
RPUSD3-210ENST00000460909 ZHX2Q9Y6X8 837 aa24.71■■□□□ 1.55
RPUSD3-210ENST00000460909 GTF2A2P52657 109 aa24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 MCMDC2Q4G0Z9 681 aa24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 CCDC84Q86UT8 332 aaPredicted RBP24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 IFNL3Q8IZI9 196 aa24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 BEGAINQ9BUH8 593 aa24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 AFG3L2Q9Y4W6 797 aa24.7■■□□□ 1.54
RPUSD3-210ENST00000460909 IGF2BP3O00425 579 aaKnown RBP eCLIP24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 CA12O43570 354 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 IFNL1Q8IU54 200 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 BRI3BPQ8WY22 251 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms