RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
CSDC2-202ENST00000460790 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
CSDC2-202ENST00000460790 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSDC2-202ENST00000460790 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
CSDC2-202ENST00000460790 MYH8P13535 1937 aa12.88□□□□□ -0.35
CSDC2-202ENST00000460790 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CSDC2-202ENST00000460790 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
CSDC2-202ENST00000460790 KDM4AO75164 1064 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 EGFRP00533 1210 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 EPS15P42566 896 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 NT5C2P49902 561 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 GABPAQ06546 454 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 TCP10Q12799 353 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
CSDC2-202ENST00000460790 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
CSDC2-202ENST00000460790 Q6ZUG5 572 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 DYNLL2Q96FJ2 89 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
CSDC2-202ENST00000460790 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-202ENST00000460790 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 PRC1O43663 620 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 CDK8P49336 464 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-202ENST00000460790 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 FAM83AQ86UY5 434 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 ESR2Q92731 530 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 LRRC2Q9BYS8 371 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-202ENST00000460790 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 LIMCH1Q9UPQ0 1083 aa12.86□□□□□ -0.35
CSDC2-202ENST00000460790 SIPA1L1O43166 1804 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 ATRNL1Q5VV63 1379 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 GLTPD2A6NH11 291 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
CSDC2-202ENST00000460790 PRDM1O75626 825 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
CSDC2-202ENST00000460790 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
CSDC2-202ENST00000460790 ZSCAN31Q96LW9 406 aaPredicted RBP12.85□□□□□ -0.35
CSDC2-202ENST00000460790 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
CSDC2-202ENST00000460790 EHD4Q9H223 541 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 SERPINB13Q9UIV8 391 aa12.85□□□□□ -0.35
CSDC2-202ENST00000460790 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 LMOD1P29536 600 aaPredicted RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 TNNI2P48788 182 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 EVCP57679 992 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 FGD1P98174 961 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 ZNF444Q8N0Y2 327 aaPredicted RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
CSDC2-202ENST00000460790 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 PGAP2Q9UHJ9 254 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
CSDC2-202ENST00000460790 SCN4AP35499 1836 aa12.83□□□□□ -0.35
CSDC2-202ENST00000460790 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-202ENST00000460790 RASA1P20936 1047 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 LIFRP42702 1097 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 CUL4AQ13619 759 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 TNFAIP1Q13829 316 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 NOL8Q76FK4 1167 aaKnown RBP12.83□□□□□ -0.36
CSDC2-202ENST00000460790 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 BRF1Q92994 677 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-202ENST00000460790 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-202ENST00000460790 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
CSDC2-202ENST00000460790 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
CSDC2-202ENST00000460790 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
CSDC2-202ENST00000460790 SHMT1P34896 483 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 TFAP4Q01664 338 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
CSDC2-202ENST00000460790 ME3Q16798 604 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms