RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 DCP1AQ9NPI6 582 aaPredicted RBP26.94■■□□□ 1.9
C9orf3-209ENST00000460573 RNF186Q9NXI6 227 aa26.94■■□□□ 1.9
C9orf3-209ENST00000460573 SSC5DA1L4H1 1573 aa26.93■■□□□ 1.9
C9orf3-209ENST00000460573 IREB2P48200 963 aaKnown RBP26.93■■□□□ 1.9
C9orf3-209ENST00000460573 MFAP1P55081 439 aaKnown RBP26.93■■□□□ 1.9
C9orf3-209ENST00000460573 NMIQ13287 307 aaPredicted RBP26.93■■□□□ 1.9
C9orf3-209ENST00000460573 GIMAP6Q6P9H5 292 aa26.93■■□□□ 1.9
C9orf3-209ENST00000460573 SDR42E1Q8WUS8 393 aa26.93■■□□□ 1.9
C9orf3-209ENST00000460573 FAM227BQ96M60 508 aa26.93■■□□□ 1.9
C9orf3-209ENST00000460573 PI4KBQ9UBF8 816 aa26.93■■□□□ 1.9
C9orf3-209ENST00000460573 PRKAB2O43741 272 aa26.92■■□□□ 1.9
C9orf3-209ENST00000460573 HLA-DOAP06340 250 aa26.92■■□□□ 1.9
C9orf3-209ENST00000460573 MAP3K10Q02779 954 aa26.92■■□□□ 1.9
C9orf3-209ENST00000460573 DGKZQ13574 1117 aa26.92■■□□□ 1.9
C9orf3-209ENST00000460573 TTC6Q86TZ1 520 aa26.92■■□□□ 1.9
C9orf3-209ENST00000460573 A0A0D9SFI3 127 aa26.91■■□□□ 1.9
C9orf3-209ENST00000460573 PATL2C9JE40 543 aaKnown RBP26.91■■□□□ 1.9
C9orf3-209ENST00000460573 TBC1D12O60347 775 aa26.91■■□□□ 1.9
C9orf3-209ENST00000460573 USP2O75604 605 aaPredicted RBP26.91■■□□□ 1.9
C9orf3-209ENST00000460573 SREBF2Q12772 1141 aa26.91■■□□□ 1.9
C9orf3-209ENST00000460573 FOXP4Q8IVH2 680 aaPredicted RBP26.91■■□□□ 1.9
C9orf3-209ENST00000460573 ZNF341Q9BYN7 854 aa26.91■■□□□ 1.9
C9orf3-209ENST00000460573 PALD1Q9ULE6 856 aa26.91■■□□□ 1.9
C9orf3-209ENST00000460573 CCDC85CA6NKD9 419 aa26.9■■□□□ 1.9
C9orf3-209ENST00000460573 AMOTL1Q8IY63 956 aa26.9■■□□□ 1.9
C9orf3-209ENST00000460573 RUFY2Q8WXA3 655 aa26.9■■□□□ 1.9
C9orf3-209ENST00000460573 MCM9Q9NXL9 1143 aa26.9■■□□□ 1.9
C9orf3-209ENST00000460573 HERC5Q9UII4 1024 aaKnown RBP26.9■■□□□ 1.9
C9orf3-209ENST00000460573 GSG1L2A8MUP6 293 aa26.89■■□□□ 1.9
C9orf3-209ENST00000460573 POLR3DP05423 398 aaPredicted RBP26.89■■□□□ 1.9
C9orf3-209ENST00000460573 CWC27Q6UX04 472 aaKnown RBP26.89■■□□□ 1.9
C9orf3-209ENST00000460573 SLC10A4Q96EP9 437 aa26.89■■□□□ 1.9
C9orf3-209ENST00000460573 NACAP1Q9BZK3 213 aa26.89■■□□□ 1.9
C9orf3-209ENST00000460573 SAP30BPQ9UHR5 308 aaKnown RBP26.89■■□□□ 1.9
C9orf3-209ENST00000460573 TAOK2Q9UL54 1235 aa26.89■■□□□ 1.9
C9orf3-209ENST00000460573 CHMLP26374 656 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 LDLRAD1Q5T700 205 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 MIGA2Q7L4E1 593 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 METTL16Q86W50 562 aaKnown RBP26.88■■□□□ 1.89
C9orf3-209ENST00000460573 MCOLN1Q9GZU1 580 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 EHD4Q9H223 541 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 FZD1Q9UP38 647 aa26.88■■□□□ 1.89
C9orf3-209ENST00000460573 MYH1P12882 1939 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 APPP05067 770 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 CCDC129Q6ZRS4 1044 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 ANKRD13AQ8IZ07 590 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 TRIM34Q9BYJ4 488 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 ARPP21Q9UBL0 812 aaPredicted RBP26.87■■□□□ 1.89
C9orf3-209ENST00000460573 ZNF112Q9UJU3 913 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 GTF3C3Q9Y5Q9 886 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 CCDC171Q6TFL3 1326 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 RAD50Q92878 1312 aa26.87■■□□□ 1.89
C9orf3-209ENST00000460573 MAP3K9P80192 1104 aa26.86■■□□□ 1.89
C9orf3-209ENST00000460573 IFNL3Q8IZI9 196 aa26.86■■□□□ 1.89
C9orf3-209ENST00000460573 NAV1Q8NEY1 1877 aa26.86■■□□□ 1.89
C9orf3-209ENST00000460573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.86■■□□□ 1.89
C9orf3-209ENST00000460573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.86■■□□□ 1.892e-7■■■□□ 18.7
C9orf3-209ENST00000460573 SBK1Q52WX2 424 aa26.85■■□□□ 1.89
C9orf3-209ENST00000460573 CRACR2BQ8N4Y2 399 aaPredicted RBP26.85■■□□□ 1.89
C9orf3-209ENST00000460573 DDX60LQ5H9U9 1706 aaKnown RBP26.85■■□□□ 1.89
C9orf3-209ENST00000460573 USP17L12C9JPN9 530 aa26.84■■□□□ 1.89
C9orf3-209ENST00000460573 USP17L21D6R901 530 aa26.84■■□□□ 1.89
C9orf3-209ENST00000460573 TDO2P48775 406 aa26.84■■□□□ 1.89
C9orf3-209ENST00000460573 ZNF589Q86UQ0 364 aaPredicted RBP26.84■■□□□ 1.89
C9orf3-209ENST00000460573 WRNIP1Q96S55 665 aa26.84■■□□□ 1.89
C9orf3-209ENST00000460573 SERPINB13Q9UIV8 391 aa26.84■■□□□ 1.89
C9orf3-209ENST00000460573 ALX1Q15699 326 aa26.83■■□□□ 1.89
C9orf3-209ENST00000460573 C12orf60Q5U649 245 aa26.83■■□□□ 1.89
C9orf3-209ENST00000460573 SPRYD7Q5W111 196 aa26.83■■□□□ 1.89
C9orf3-209ENST00000460573 CTR9Q6PD62 1173 aa26.83■■□□□ 1.89
C9orf3-209ENST00000460573 HSPD1P10809 573 aaKnown RBP26.82■■□□□ 1.88
C9orf3-209ENST00000460573 PLCD1P51178 756 aa26.82■■□□□ 1.88
C9orf3-209ENST00000460573 CASC1Q6TDU7 716 aa26.82■■□□□ 1.88
C9orf3-209ENST00000460573 NAPBQ9H115 298 aa26.82■■□□□ 1.88
C9orf3-209ENST00000460573 EPB41L4AQ9HCS5 686 aaPredicted RBP26.82■■□□□ 1.88
C9orf3-209ENST00000460573 CSADQ9Y600 493 aa26.82■■□□□ 1.88
C9orf3-209ENST00000460573 MANSC4A6NHS7 340 aaPredicted RBP26.81■■□□□ 1.88
C9orf3-209ENST00000460573 PHF20L1A8MW92 1017 aa26.81■■□□□ 1.88
C9orf3-209ENST00000460573 CTNND1O60716 968 aaKnown RBP26.81■■□□□ 1.88
C9orf3-209ENST00000460573 TBC1D8O95759 1140 aa26.81■■□□□ 1.88
C9orf3-209ENST00000460573 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.81■■□□□ 1.88
C9orf3-209ENST00000460573 TM4SF4P48230 202 aa26.8■■□□□ 1.88
C9orf3-209ENST00000460573 SLC4A8Q2Y0W8 1093 aa26.8■■□□□ 1.88
C9orf3-209ENST00000460573 NOL9Q5SY16 702 aaKnown RBP26.8■■□□□ 1.88
C9orf3-209ENST00000460573 SWAP70Q9UH65 585 aa26.8■■□□□ 1.88
C9orf3-209ENST00000460573 ZMYM6O95789 1325 aa26.8■■□□□ 1.88
C9orf3-209ENST00000460573 SIPA1L1O43166 1804 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 SGSM2O43147 1006 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 CDC45O75419 566 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 ALDH1A1P00352 501 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 ZBTB48P10074 688 aaPredicted RBP26.79■■□□□ 1.88
C9orf3-209ENST00000460573 GABPAQ06546 454 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 VGLL4Q14135 290 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 VPS53Q5VIR6 699 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 WNK4Q96J92 1243 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 CLMNQ96JQ2 1002 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 DSCC1Q9BVC3 393 aa26.79■■□□□ 1.88
C9orf3-209ENST00000460573 FOXP2O15409 715 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 CYP2D6P10635 497 aa26.78■■□□□ 1.88
C9orf3-209ENST00000460573 INPP5BP32019 993 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms