RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 L3MBTL3Q96JM7 780 aaPredicted RBP16.43■□□□□ 0.22
ERCC3-205ENST00000460485 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
ERCC3-205ENST00000460485 ATP8A2Q9NTI2 1148 aa16.43■□□□□ 0.22
ERCC3-205ENST00000460485 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
ERCC3-205ENST00000460485 NSFL1CQ9UNZ2 370 aaKnown RBP16.43■□□□□ 0.22
ERCC3-205ENST00000460485 NEDD4P46934 1319 aa16.43■□□□□ 0.22
ERCC3-205ENST00000460485 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
ERCC3-205ENST00000460485 SCN4AP35499 1836 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 CTAGE5O15320 804 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 HSPA8P11142 646 aaKnown RBP16.42■□□□□ 0.22
ERCC3-205ENST00000460485 PDE6BP35913 854 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-205ENST00000460485 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-205ENST00000460485 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 LY9Q9HBG7 655 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-205ENST00000460485 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-205ENST00000460485 RCOR1Q9UKL0 485 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
ERCC3-205ENST00000460485 B4E1Z4 1266 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
ERCC3-205ENST00000460485 BBOX1O75936 387 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 YEATS4O95619 227 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 FGRP09769 529 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 CCDC192P0DO97 292 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-205ENST00000460485 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 PRR5LQ6MZQ0 368 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 NSUN4Q96CB9 384 aaKnown RBP16.41■□□□□ 0.22
ERCC3-205ENST00000460485 CHAMP1Q96JM3 812 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
ERCC3-205ENST00000460485 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-205ENST00000460485 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CDK5RAP2Q96SN8 1893 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 GOLGA8AA7E2F4 631 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 SNAP23O00161 211 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 C21orf2O43822 256 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 LDHCP07864 332 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CALM1P0DP23 149 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CALM2P0DP24 149 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CALM3P0DP25 149 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 TRIM29Q14134 588 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 WTAPQ15007 396 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 MAP3K11Q16584 847 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 SBK1Q52WX2 424 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 TRIM22Q8IYM9 498 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 KCNG4Q8TDN1 519 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 UBAC1Q9BSL1 405 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
ERCC3-205ENST00000460485 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
ERCC3-205ENST00000460485 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-205ENST00000460485 ORC4O43929 436 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 KDM4AO75164 1064 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 FDPSP14324 419 aaKnown RBP16.39■□□□□ 0.21
ERCC3-205ENST00000460485 IFNAR1P17181 557 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
ERCC3-205ENST00000460485 SLF2Q8IX21 1173 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 AMOTL1Q8IY63 956 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■□□□ 12
ERCC3-205ENST00000460485 RBSNQ9H1K0 784 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
ERCC3-205ENST00000460485 A0A1W2PQ27 194 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 A0A1W2PQ64 194 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 A0A1W2PQD8 194 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 TDRD7Q8NHU6 1098 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 ZSWIM5Q9P217 1185 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 DDX60LQ5H9U9 1706 aaKnown RBP16.38■□□□□ 0.21
ERCC3-205ENST00000460485 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
ERCC3-205ENST00000460485 DDAH1O94760 285 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-205ENST00000460485 BAG3O95817 575 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 MECOMQ03112 1051 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 TBC1D22AQ8WUA7 517 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
ERCC3-205ENST00000460485 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 DEXIO95424 95 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms