RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GNAT2P19087 354 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
LMNB1-203ENST00000460265 AFMP43652 599 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 DPCR1Q3MIW9 517 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-203ENST00000460265 BCL9O00512 1426 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 GUCY1A2P33402 732 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
LMNB1-203ENST00000460265 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 SKILP12757 684 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 PNOCQ13519 176 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 AK7Q96M32 723 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 BRMS1Q9HCU9 246 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 TNKSO95271 1327 aa17.65■□□□□ 0.42
LMNB1-203ENST00000460265 KIAA1468Q9P260 1216 aa17.64■□□□□ 0.42
LMNB1-203ENST00000460265 HOOK1Q9UJC3 728 aaKnown RBP17.64■□□□□ 0.42
LMNB1-203ENST00000460265 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.42
LMNB1-203ENST00000460265 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.41
LMNB1-203ENST00000460265 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
LMNB1-203ENST00000460265 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
LMNB1-203ENST00000460265 RAD51AP2Q09MP3 1159 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 TEX35Q5T0J7 233 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 NLRP5P59047 1200 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 ELF2Q15723 593 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 VGLL2Q8N8G2 317 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 STAMQ92783 540 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 F8W031 263 aaPredicted RBP17.63■□□□□ 0.41
LMNB1-203ENST00000460265 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 YEATS4O95619 227 aa17.63■□□□□ 0.41
LMNB1-203ENST00000460265 CRNKL1Q9BZJ0 848 aaKnown RBP17.63■□□□□ 0.41
LMNB1-203ENST00000460265 POLR3GO15318 223 aaPredicted RBP17.62■□□□□ 0.41
LMNB1-203ENST00000460265 POLR2DO15514 142 aaKnown RBP17.62■□□□□ 0.41
LMNB1-203ENST00000460265 KLRK1P26718 216 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
LMNB1-203ENST00000460265 TMTC2Q8N394 836 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 IGDCC4Q8TDY8 1250 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 NTSR2O95665 410 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 PRDX5P30044 214 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 ATP2B2Q01814 1243 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 ZNF174Q15697 407 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 FBXO38Q6PIJ6 1188 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
LMNB1-203ENST00000460265 USP21Q9UK80 565 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 KCNH3Q9ULD8 1083 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 BMS1Q14692 1282 aaKnown RBP17.62■□□□□ 0.41
LMNB1-203ENST00000460265 ZNF827Q17R98 1081 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 C10orf67Q8IYJ2 551 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 DHX58Q96C10 678 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 AGXT2Q9BYV1 514 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 RASSF4Q9H2L5 321 aa17.62■□□□□ 0.41
LMNB1-203ENST00000460265 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
LMNB1-203ENST00000460265 CAVIN2O95810 425 aa17.61■□□□□ 0.41
LMNB1-203ENST00000460265 CACTINQ8WUQ7 758 aaKnown RBP17.61■□□□□ 0.41
LMNB1-203ENST00000460265 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
LMNB1-203ENST00000460265 NBPF3Q9H094 633 aa17.61■□□□□ 0.41
LMNB1-203ENST00000460265 TULP1O00294 542 aaPredicted RBP17.61■□□□□ 0.41
LMNB1-203ENST00000460265 NMT2O60551 498 aa17.61■□□□□ 0.41
LMNB1-203ENST00000460265 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■■■■ 32.9
LMNB1-203ENST00000460265 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 SNW1Q13573 536 aaKnown RBP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 SLC39A14Q15043 492 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 POLR3EQ9NVU0 708 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 MRC1P22897 1456 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 CYP2C19P33261 490 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 STX17P56962 302 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
LMNB1-203ENST00000460265 ZNF444Q8N0Y2 327 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
LMNB1-203ENST00000460265 FGFR2P21802 821 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
LMNB1-203ENST00000460265 PTPN14Q15678 1187 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 GRAMD1CQ8IYS0 662 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 FMR1NBQ8N0W7 255 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-203ENST00000460265 NEK11Q8NG66 645 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 TDRD7Q8NHU6 1098 aaKnown RBP17.59■□□□□ 0.41
LMNB1-203ENST00000460265 DEXIO95424 95 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 CYP2D6P10635 497 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 UBASH3AP57075 661 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 PDE4BQ07343 736 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 CCDC144BQ3MJ40 725 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 FAM84BQ96KN1 310 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-203ENST00000460265 XPO4Q9C0E2 1151 aaKnown RBP17.59■□□□□ 0.41
LMNB1-203ENST00000460265 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 UBE4AQ14139 1066 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms