RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 NKD1Q969G9 470 aa10.15□□□□□ -0.78
CKAP2-204ENST00000459902 ISL2Q96A47 359 aa10.15□□□□□ -0.78
CKAP2-204ENST00000459902 WNT10AQ9GZT5 417 aa10.15□□□□□ -0.78
CKAP2-204ENST00000459902 SEMA6CQ9H3T2 930 aa10.15□□□□□ -0.78
CKAP2-204ENST00000459902 POLR3KQ9Y2Y1 108 aaPredicted RBP10.15□□□□□ -0.78
CKAP2-204ENST00000459902 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
CKAP2-204ENST00000459902 IGHA1P01876 353 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 PRR23CQ6ZRP0 262 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 CLEC10AQ8IUN9 316 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 SLITRK4Q8IW52 837 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 YIPF2Q9BWQ6 316 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 BRMS1Q9HCU9 246 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
CKAP2-204ENST00000459902 FAM95CA0A1B0GW59 222 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 GRIN3BO60391 1043 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 GRK4P32298 578 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 GJA8P48165 433 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
CKAP2-204ENST00000459902 UBE3DQ7Z6J8 389 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 FAM83CQ9BQN1 747 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 CAPN10Q9HC96 672 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 STOML1Q9UBI4 398 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 DAGLAQ9Y4D2 1042 aa10.13□□□□□ -0.79
CKAP2-204ENST00000459902 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 NKAPLQ5M9Q1 402 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 ZNF507Q8TCN5 953 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 GPRASP2Q96D09 838 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 LGR6Q9HBX8 967 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 PCOLCE2Q9UKZ9 415 aa10.12□□□□□ -0.79
CKAP2-204ENST00000459902 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 HMX2A2RU54 273 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 DYNC1LI2O43237 492 aaPredicted RBP10.11□□□□□ -0.79
CKAP2-204ENST00000459902 MAP7Q14244 749 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
CKAP2-204ENST00000459902 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 FBRSQ9HAH7 460 aa10.11□□□□□ -0.79
CKAP2-204ENST00000459902 SSU72Q9NP77 194 aaKnown RBP10.11□□□□□ -0.79
CKAP2-204ENST00000459902 PGRP06401 933 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 H2AFB2P0C5Z0 115 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 MCM4P33991 863 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 PDE4BQ07343 736 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 SEZ6L2Q6UXD5 910 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.1□□□□□ -0.79
CKAP2-204ENST00000459902 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
CKAP2-204ENST00000459902 PLCG1P19174 1290 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 CLCQ05315 142 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 PAOXQ6QHF9 649 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 GK5Q6ZS86 529 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 HID1Q8IV36 788 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 PCDHB14Q9Y5E9 798 aa10.09□□□□□ -0.79
CKAP2-204ENST00000459902 HTR3BO95264 441 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 ZNF165P49910 485 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
CKAP2-204ENST00000459902 NKG7Q16617 165 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 REXO1Q8N1G1 1221 aaKnown RBP10.08□□□□□ -0.8
CKAP2-204ENST00000459902 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 SPATA32Q96LK8 384 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 C1GALT1Q9NS00 363 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 REV1Q9UBZ9 1251 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 TJP2Q9UDY2 1190 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 ADAM30Q9UKF2 790 aa10.08□□□□□ -0.8
CKAP2-204ENST00000459902 ATE1O95260 518 aa10.07□□□□□ -0.8
CKAP2-204ENST00000459902 SLBPQ14493 270 aaKnown RBP eCLIP10.07□□□□□ -0.8
CKAP2-204ENST00000459902 ACSF2Q96CM8 615 aaPredicted RBP10.07□□□□□ -0.8
CKAP2-204ENST00000459902 EFR3BQ9Y2G0 817 aa10.07□□□□□ -0.8
CKAP2-204ENST00000459902 FURINP09958 794 aa10.06□□□□□ -0.8
CKAP2-204ENST00000459902 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
CKAP2-204ENST00000459902 NAALADL2Q58DX5 795 aa10.06□□□□□ -0.8
CKAP2-204ENST00000459902 TMEM201Q5SNT2 666 aa10.06□□□□□ -0.8
CKAP2-204ENST00000459902 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
CKAP2-204ENST00000459902 PRKAG2Q9UGJ0 569 aa10.06□□□□□ -0.8
CKAP2-204ENST00000459902 DYRK3O43781 588 aa10.05□□□□□ -0.8
CKAP2-204ENST00000459902 SOX9P48436 509 aa10.05□□□□□ -0.8
CKAP2-204ENST00000459902 MCATQ8IVS2 390 aaKnown RBP10.05□□□□□ -0.8
CKAP2-204ENST00000459902 TMEM87BQ96K49 555 aa10.05□□□□□ -0.8
CKAP2-204ENST00000459902 UPK3BL1B0FP48 263 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 UPK3BL2E5RIL1 263 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-204ENST00000459902 CAP2P40123 477 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 NASPP49321 788 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-204ENST00000459902 CDK5R2Q13319 367 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 COL9A2Q14055 689 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-204ENST00000459902 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
CKAP2-204ENST00000459902 SHISA5Q8N114 240 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 SLC43A3Q8NBI5 491 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
CKAP2-204ENST00000459902 DNAJA2O60884 412 aa10.03□□□□□ -0.8
CKAP2-204ENST00000459902 ADMP35318 185 aa10.03□□□□□ -0.8
CKAP2-204ENST00000459902 SLC6A19Q695T7 634 aa10.03□□□□□ -0.8
CKAP2-204ENST00000459902 VPS37DQ86XT2 251 aa10.03□□□□□ -0.8
CKAP2-204ENST00000459902 GATA6Q92908 595 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms