RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CETPP11597 493 aa19.46■□□□□ 0.71
CD28-203ENST00000458610 SNAPC2Q13487 334 aa19.46■□□□□ 0.71
CD28-203ENST00000458610 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
CD28-203ENST00000458610 TESPA1A2RU30 521 aaPredicted RBP19.45■□□□□ 0.7
CD28-203ENST00000458610 POLR3DP05423 398 aaPredicted RBP19.45■□□□□ 0.7
CD28-203ENST00000458610 TICAM2Q86XR7 235 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 IFNL1Q8IU54 200 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 EVI5LQ96CN4 794 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 FSD1Q9BTV5 496 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 ATP8A2Q9NTI2 1148 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 SAP30BPQ9UHR5 308 aaKnown RBP19.45■□□□□ 0.7
CD28-203ENST00000458610 TAOK2Q9UL54 1235 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 DOCK2Q92608 1830 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
CD28-203ENST00000458610 MBD4O95243 580 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 GJA5P36382 358 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 APPBP2Q92624 585 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 ARMT1Q9H993 441 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 GINM1Q9NU53 330 aa19.44■□□□□ 0.7
CD28-203ENST00000458610 CCL15-CCL14A0A0B4J2E2 113 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 CXCL11O14625 94 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 CCL15Q16663 113 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 METTL16Q86W50 562 aaKnown RBP19.43■□□□□ 0.7
CD28-203ENST00000458610 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 EHD4Q9H223 541 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 MCM9Q9NXL9 1143 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 SERPINB13Q9UIV8 391 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 ZHX2Q9Y6X8 837 aa19.43■□□□□ 0.7
CD28-203ENST00000458610 MYO5AQ9Y4I1 1855 aaKnown RBP19.43■□□□□ 0.7
CD28-203ENST00000458610 IRF6O14896 467 aa19.42■□□□□ 0.7
CD28-203ENST00000458610 GNAT2P19087 354 aa19.42■□□□□ 0.7
CD28-203ENST00000458610 CAP2P40123 477 aa19.42■□□□□ 0.7
CD28-203ENST00000458610 CFHR5Q9BXR6 569 aa19.42■□□□□ 0.7
CD28-203ENST00000458610 DCP1AQ9NPI6 582 aaPredicted RBP19.42■□□□□ 0.7
CD28-203ENST00000458610 PTPRAP18433 802 aa19.41■□□□□ 0.7
CD28-203ENST00000458610 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
CD28-203ENST00000458610 OSBPL3Q9H4L5 887 aa19.41■□□□□ 0.7
CD28-203ENST00000458610 ZCCHC17Q9NP64 241 aaKnown RBP19.41■□□□□ 0.7
CD28-203ENST00000458610 TSKSQ9UJT2 592 aa19.41■□□□□ 0.7
CD28-203ENST00000458610 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
CD28-203ENST00000458610 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
CD28-203ENST00000458610 FAM196BA6NMK8 535 aa19.4■□□□□ 0.7
CD28-203ENST00000458610 ASNSP08243 561 aa19.4■□□□□ 0.7
CD28-203ENST00000458610 NOM1Q5C9Z4 860 aaKnown RBP19.4■□□□□ 0.7
CD28-203ENST00000458610 FASTKD5Q7L8L6 764 aaKnown RBP19.4■□□□□ 0.7
CD28-203ENST00000458610 SDR42E1Q8WUS8 393 aa19.4■□□□□ 0.7
CD28-203ENST00000458610 AS3MTQ9HBK9 375 aa19.4■□□□□ 0.7
CD28-203ENST00000458610 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
CD28-203ENST00000458610 SLFNL1Q499Z3 407 aa19.39■□□□□ 0.69
CD28-203ENST00000458610 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
CD28-203ENST00000458610 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
CD28-203ENST00000458610 BRI3BPQ8WY22 251 aa19.39■□□□□ 0.69
CD28-203ENST00000458610 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.69
CD28-203ENST00000458610 USP17L5A8MUK1 530 aa19.38■□□□□ 0.69
CD28-203ENST00000458610 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
CD28-203ENST00000458610 TBC1D8O95759 1140 aa19.38■□□□□ 0.69
CD28-203ENST00000458610 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
CD28-203ENST00000458610 OSBP2Q969R2 916 aa19.38■□□□□ 0.69
CD28-203ENST00000458610 ZFYVE28Q9HCC9 887 aa19.38■□□□□ 0.69
CD28-203ENST00000458610 AFG3L2Q9Y4W6 797 aa19.38■□□□□ 0.69
CD28-203ENST00000458610 PRKAB2O43741 272 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 NEFLP07196 543 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 SLURP2P0DP57 97 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 PLCD1P51178 756 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 SLC4A8Q2Y0W8 1093 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 COL13A1Q5TAT6 717 aaPredicted RBP19.37■□□□□ 0.69
CD28-203ENST00000458610 TATDN1Q6P1N9 297 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 ANKRD23Q86SG2 305 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 PTPN18Q99952 460 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 NACAP1Q9BZK3 213 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 OTOFQ9HC10 1997 aa19.37■□□□□ 0.69
CD28-203ENST00000458610 GPAA1O43292 621 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 CHGBP05060 677 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 APPP05067 770 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 TAF1CQ15572 869 aaPredicted RBP19.36■□□□□ 0.69
CD28-203ENST00000458610 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
CD28-203ENST00000458610 ZMYM1Q5SVZ6 1142 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 ZNF280CQ8ND82 737 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 HELLSQ9NRZ9 838 aa19.36■□□□□ 0.69
CD28-203ENST00000458610 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
CD28-203ENST00000458610 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
CD28-203ENST00000458610 USP17L12C9JPN9 530 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 USP17L21D6R901 530 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 GPR25O00155 361 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 WDR18Q9BV38 432 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 DNAJC18Q9H819 358 aa19.35■□□□□ 0.69
CD28-203ENST00000458610 A0A0G2JLL6 359 aaPredicted RBP19.34■□□□□ 0.69
CD28-203ENST00000458610 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 BTBD19C9JJ37 291 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 GABPAQ06546 454 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 SPP2Q13103 211 aa19.34■□□□□ 0.69
CD28-203ENST00000458610 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms