RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	EYA2	O00167	538 aa		11.35	□□□□□ -0.59
MKLN1-206	ENST00000458153	ZNF697	Q5TEC3	545 aa		11.35	□□□□□ -0.59
MKLN1-206	ENST00000458153	PRKAR2A	P13861	404 aa	Known RBP	11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	TRIM32	Q13049	653 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	FOCAD	Q5VW36	1801 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	ZNF236	Q9UL36	1845 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	CIAO1	O76071	339 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	ZKSCAN1	P17029	563 aa	Predicted RBP	11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	SLC4A10	Q6U841	1118 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	ZNF280C	Q8ND82	737 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	NUDT12	Q9BQG2	462 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	RLF	Q13129	1914 aa		11.34	□□□□□ -0.59
MKLN1-206	ENST00000458153	RFX5	P48382	616 aa	Predicted RBP	11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	LRRC26	Q2I0M4	334 aa		11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	USP6NL	Q92738	828 aa		11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	SYMPK	Q92797	1274 aa	Known RBP	11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	AS3MT	Q9HBK9	375 aa		11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	DDTL	A6NHG4	134 aa	Predicted RBP	11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	MAPK4	P31152	587 aa		11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.33	□□□□□ -0.6
MKLN1-206	ENST00000458153	MROH7-TTC4	A0A0A0MT08	1334 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	TMEM265	A0A087WTH1	108 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	PDE3A	Q14432	1141 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	ATP2B3	Q16720	1220 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	APBA2	Q99767	749 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	DDX4	Q9NQI0	724 aa	Known RBP	11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	GINM1	Q9NU53	330 aa		11.32	□□□□□ -0.6
MKLN1-206	ENST00000458153	HOXA7	P31268	230 aa	Predicted RBP	11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	RGS2	P41220	211 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	LHX8	Q68G74	356 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	ATG9A	Q7Z3C6	839 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	MAFA	Q8NHW3	353 aa	Predicted RBP	11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	WDR18	Q9BV38	432 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	PTPRC	P08575	1304 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	CDK5RAP2	Q96SN8	1893 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	USP17L5	A8MUK1	530 aa		11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	DZIP1	Q86YF9	867 aa	Known RBP	11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	RANBP2	P49792	3224 aa	Known RBP	11.31	□□□□□ -0.6
MKLN1-206	ENST00000458153	BTD	P43251	543 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	IRX3	P78415	501 aa	Predicted RBP	11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	MDM2	Q00987	491 aa	Predicted RBP	11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	CACNB2	Q08289	660 aa	Predicted RBP	11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	SPP2	Q13103	211 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	MORN1	Q5T089	497 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	GPRC5A	Q8NFJ5	357 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	KLHDC4	Q8TBB5	520 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	GPR75-ASB3	A0A0A6YYF3	556 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	MSC	O60682	206 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	CYP2B6	P20813	491 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	CAP2	P40123	477 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	HMGCS2	P54868	508 aa		11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	SMAD3	P84022	425 aa	Known RBP	11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	HERC5	Q9UII4	1024 aa	Known RBP	11.3	□□□□□ -0.6
MKLN1-206	ENST00000458153	RHBDL3	P58872	404 aa		11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	CDX2	Q99626	313 aa	Predicted RBP	11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	PHKA1	P46020	1223 aa		11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	CCDC84	Q86UT8	332 aa	Predicted RBP	11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	TMOD4	Q9NZQ9	345 aa		11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	CEP126	Q9P2H0	1117 aa		11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.29	□□□□□ -0.6
MKLN1-206	ENST00000458153	C19orf81	C9J6K1	198 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	CCND3	P30281	292 aa	Predicted RBP	11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	GSTO1	P78417	241 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	DNM1L	O00429	736 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	HERVK_113	P62684	666 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	PICALM	Q13492	652 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	PLEKHH3	Q7Z736	793 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	SEMA6B	Q9H3T3	888 aa		11.28	□□□□□ -0.6
MKLN1-206	ENST00000458153	IL15	P40933	162 aa	Predicted RBP	11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	BACE1	P56817	501 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	ERVK-9	P63128	1117 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	ERVK-24	P63145	666 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	MFSD14C	Q5VZR4	134 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	USP44	Q9H0E7	712 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153	PRKAG2	Q9UGJ0	569 aa		11.27	□□□□□ -0.6
MKLN1-206	ENST00000458153		A0A0G2JMZ2	1700 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	GLRX3	O76003	335 aa	Known RBP	11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	LDHC	P07864	332 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	RTP1	P59025	263 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	MAP2K5	Q13163	448 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	RASGRF1	Q13972	1273 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	CCDC102B	Q68D86	513 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	GPR142	Q7Z601	462 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	MRPL50	Q8N5N7	158 aa	Known RBP	11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	LPAR1	Q92633	364 aa		11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	DDX20	Q9UHI6	824 aa	Known RBP	11.27	□□□□□ -0.61
MKLN1-206	ENST00000458153	ERICH6	Q7L0X2	663 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	P2RX7	Q99572	595 aa	Known RBP	11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	TXNRD2	Q9NNW7	524 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	SLC15A5	A6NIM6	579 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	ASNS	P08243	561 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	HOXC6	P09630	235 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	SLURP2	P0DP57	97 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	MTMR2	Q13614	643 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	SNX17	Q15036	470 aa		11.26	□□□□□ -0.61
MKLN1-206	ENST00000458153	COL6A3	P12111	3177 aa		11.25	□□□□□ -0.61

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