RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 CCSER2Q9H7U1 834 aa5.14□□□□□ -1.59
HMGB3P30-201ENST00000457863 JADE2Q9NQC1 790 aa5.14□□□□□ -1.59
HMGB3P30-201ENST00000457863 MRPL42Q9Y6G3 142 aaKnown RBP5.14□□□□□ -1.59
HMGB3P30-201ENST00000457863 PTMAP06454 111 aaKnown RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 BDNFP23560 247 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 MAPK1P28482 360 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 RXRBP28702 533 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 HOXA10P31260 410 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 PTPN12Q05209 780 aaKnown RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 PDE3BQ13370 1112 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 GNL2Q13823 731 aaKnown RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 CDPF1Q6NVV7 123 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 ZAR1Q86SH2 424 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 AMOTL1Q8IY63 956 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 TMEM87AQ8NBN3 555 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 GATA6Q92908 595 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 RNF34Q969K3 372 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 CITED4Q96RK1 184 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 TRIM56Q9BRZ2 755 aaKnown RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 OSBPL1AQ9BXW6 950 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 ACBD3Q9H3P7 528 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 ZFYVE1Q9HBF4 777 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 METTL5Q9NRN9 209 aaKnown RBP5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 ATG3Q9NT62 314 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 DCTN4Q9UJW0 460 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 SYNGAP1Q96PV0 1343 aa5.13□□□□□ -1.59
HMGB3P30-201ENST00000457863 IGHA2P01877 340 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 CTSBP07858 339 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 XRCC5P13010 732 aaKnown RBP5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 DRD2P14416 443 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 TAL1P17542 331 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 DNAJA1P31689 397 aaKnown RBP5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 USP11P51784 963 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 EVA1CP58658 441 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 POU4F3Q15319 338 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 SPRED3Q2MJR0 410 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 USPL1Q5W0Q7 1092 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 PRPF40BQ6NWY9 871 aaKnown RBP5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 VSIG10LQ86VR7 867 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 FBXL6Q8N531 539 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 FBLIM1Q8WUP2 373 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 GSX1Q9H4S2 264 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 ADGRE2Q9UHX3 823 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 ACTL7BQ9Y614 415 aa5.12□□□□□ -1.59
HMGB3P30-201ENST00000457863 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 CCDC189A1A4V9 331 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 ENPP3O14638 875 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 CPNE3O75131 537 aaKnown RBP5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 MAOBP27338 520 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 TNNI2P48788 182 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 FANCCQ00597 558 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 ARID5AQ03989 594 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 MAP7Q14244 749 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 DDX54Q8TDD1 881 aaKnown RBP5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 C8orf48Q96LL4 319 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 DNAJC25Q9H1X3 360 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 ACSS3Q9H6R3 686 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 ABCB6Q9NP58 842 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 NPHS2Q9NP85 383 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 SWAP70Q9UH65 585 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 WWC3Q9ULE0 1092 aa5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 ANGEL1Q9UNK9 670 aaKnown RBP5.11□□□□□ -1.59
HMGB3P30-201ENST00000457863 PDGFRBP09619 1106 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 ADMP35318 185 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 TXKP42681 527 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 AMPD3Q01432 767 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 ORC1Q13415 861 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 UBE4AQ14139 1066 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 NFKBIBQ15653 356 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 NFE2L2Q16236 605 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 RPS26P11Q5JNZ5 115 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 NFXL1Q6ZNB6 911 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 RINLQ6ZS11 566 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 JDP2Q8WYK2 163 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 ALKBH8Q96BT7 664 aaKnown RBP5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 FRMD6Q96NE9 622 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 TBC1D32Q96NH3 1257 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 CORO1BQ9BR76 489 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 EHD4Q9H223 541 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 SEMA6CQ9H3T2 930 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 TYW1Q9NV66 732 aaKnown RBP5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 CCDC39Q9UFE4 941 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 TCEAL9Q9UHQ7 104 aa5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P30-201ENST00000457863 PPP1R12AO14974 1030 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 GPR182O15218 404 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 VIL1P09327 827 aaKnown RBP5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 CYP27A1Q02318 531 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 AP3B2Q13367 1082 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 MAP9Q49MG5 647 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 ABI1Q8IZP0 508 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 SHISA5Q8N114 240 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 SDR16C5Q8N3Y7 309 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 IL17RAQ96F46 866 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 MRFAP1L1Q96HT8 127 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 FBXL18Q96ME1 805 aa5.09□□□□□ -1.59
HMGB3P30-201ENST00000457863 TMX1Q9H3N1 280 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms