RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 TRIB2Q92519 343 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 SLURP2P0DP57 97 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 COL6A1P12109 1028 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 PRKAR2AP13861 404 aaKnown RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 SPP2Q13103 211 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
SNHG17-208ENST00000456953 TTC28Q96AY4 2481 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 CDH23Q9H251 3354 aa16.4■□□□□ 0.22
SNHG17-208ENST00000456953 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
SNHG17-208ENST00000456953 PICALMQ13492 652 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 GUCD1Q96NT3 240 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 OSBPL5Q9H0X9 879 aaPredicted RBP16.39■□□□□ 0.21
SNHG17-208ENST00000456953 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 PLXNB2O15031 1838 aa16.39■□□□□ 0.21
SNHG17-208ENST00000456953 COL2A1P02458 1487 aaPredicted RBP16.39■□□□□ 0.21
SNHG17-208ENST00000456953 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 CIAO1O76071 339 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 PHKA1P46020 1223 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 HMGCS2P54868 508 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
SNHG17-208ENST00000456953 SOCS4Q8WXH5 440 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 MUC3AQ02505 3323 aa16.38■□□□□ 0.21
SNHG17-208ENST00000456953 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
SNHG17-208ENST00000456953 CYP2B6P20813 491 aa16.37■□□□□ 0.21
SNHG17-208ENST00000456953 BTDP43251 543 aa16.37■□□□□ 0.21
SNHG17-208ENST00000456953 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
SNHG17-208ENST00000456953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■□□□□ 8.5
SNHG17-208ENST00000456953 PTPRCP08575 1304 aa16.37■□□□□ 0.21
SNHG17-208ENST00000456953 PDS5AQ29RF7 1337 aaKnown RBP16.37■□□□□ 0.21
SNHG17-208ENST00000456953 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
SNHG17-208ENST00000456953 LRRC26Q2I0M4 334 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 SPTY2D1Q68D10 685 aaPredicted RBP16.36■□□□□ 0.21
SNHG17-208ENST00000456953 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 SIL1Q9H173 461 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 ABCF2Q9UG63 623 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
SNHG17-208ENST00000456953 GPR75-ASB3A0A0A6YYF3 556 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 USP17L5A8MUK1 530 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 RHBDL3P58872 404 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 IRX3P78415 501 aaPredicted RBP16.35■□□□□ 0.21
SNHG17-208ENST00000456953 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
SNHG17-208ENST00000456953 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 LHX8Q68G74 356 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 GPRC5AQ8NFJ5 357 aa16.35■□□□□ 0.21
SNHG17-208ENST00000456953 ATAD5Q96QE3 1844 aa16.34■□□□□ 0.21
SNHG17-208ENST00000456953 MAP4K4O95819 1239 aaPredicted RBP16.34■□□□□ 0.21
SNHG17-208ENST00000456953 CAP2P40123 477 aa16.34■□□□□ 0.21
SNHG17-208ENST00000456953 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
SNHG17-208ENST00000456953 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
SNHG17-208ENST00000456953 LBHD1Q9BQE6 289 aaPredicted RBP16.34■□□□□ 0.21
SNHG17-208ENST00000456953 AS3MTQ9HBK9 375 aa16.34■□□□□ 0.21
SNHG17-208ENST00000456953 MAPK4P31152 587 aa16.33■□□□□ 0.2
SNHG17-208ENST00000456953 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
SNHG17-208ENST00000456953 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
SNHG17-208ENST00000456953 ZNF697Q5TEC3 545 aa16.33■□□□□ 0.2
SNHG17-208ENST00000456953 FAM161BQ96MY7 647 aa16.33■□□□□ 0.2
SNHG17-208ENST00000456953 ADORA1P30542 326 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 HERVK_113P62684 666 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 MECOMQ03112 1051 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 MTMR2Q13614 643 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 USP6NLQ92738 828 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 P2RX7Q99572 595 aaKnown RBP16.32■□□□□ 0.2
SNHG17-208ENST00000456953 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 TXNRD2Q9NNW7 524 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
SNHG17-208ENST00000456953 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
SNHG17-208ENST00000456953 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
SNHG17-208ENST00000456953 RGS2P41220 211 aa16.31■□□□□ 0.2
SNHG17-208ENST00000456953 BACE1P56817 501 aa16.31■□□□□ 0.2
SNHG17-208ENST00000456953 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
SNHG17-208ENST00000456953 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
SNHG17-208ENST00000456953 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
SNHG17-208ENST00000456953 APBA2Q99767 749 aa16.31■□□□□ 0.2
SNHG17-208ENST00000456953 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
SNHG17-208ENST00000456953 GSTO1P78417 241 aa16.3■□□□□ 0.2
SNHG17-208ENST00000456953 MORN1Q5T089 497 aa16.3■□□□□ 0.2
SNHG17-208ENST00000456953 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
SNHG17-208ENST00000456953 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
SNHG17-208ENST00000456953 MAST2Q6P0Q8 1798 aa16.3■□□□□ 0.2
SNHG17-208ENST00000456953 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
SNHG17-208ENST00000456953 PEX10O60683 326 aa16.29■□□□□ 0.2
SNHG17-208ENST00000456953 LDHCP07864 332 aa16.29■□□□□ 0.2
SNHG17-208ENST00000456953 ASNSP08243 561 aa16.29■□□□□ 0.2
SNHG17-208ENST00000456953 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms