RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 MYCP01106 439 aaPredicted RBP26.67■■□□□ 1.86
SEC22C-213ENST00000456222 KIF22Q14807 665 aa26.67■■□□□ 1.86
SEC22C-213ENST00000456222 GADL1Q6ZQY3 521 aa26.67■■□□□ 1.86
SEC22C-213ENST00000456222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.67■■□□□ 1.86
SEC22C-213ENST00000456222 NDUFB9Q9Y6M9 179 aa26.67■■□□□ 1.86
SEC22C-213ENST00000456222 BCRP11274 1271 aa26.66■■□□□ 1.86
SEC22C-213ENST00000456222 PSMC4P43686 418 aa26.66■■□□□ 1.86
SEC22C-213ENST00000456222 PARK7Q99497 189 aaKnown RBP26.66■■□□□ 1.86
SEC22C-213ENST00000456222 PPP4CP60510 307 aa26.64■■□□□ 1.86
SEC22C-213ENST00000456222 PRPF38BQ5VTL8 546 aaKnown RBP26.64■■□□□ 1.86
SEC22C-213ENST00000456222 FASTKD5Q7L8L6 764 aaKnown RBP26.64■■□□□ 1.86
SEC22C-213ENST00000456222 OSBPP22059 807 aa26.63■■□□□ 1.85
SEC22C-213ENST00000456222 MAPKAPK5Q8IW41 473 aa26.63■■□□□ 1.85
SEC22C-213ENST00000456222 TGFBRAP1Q8WUH2 860 aa26.63■■□□□ 1.85
SEC22C-213ENST00000456222 SRRDQ9UH36 339 aa26.63■■□□□ 1.85
SEC22C-213ENST00000456222 LOC285556D6RIA3 1793 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 DYNLL1P63167 89 aaKnown RBP26.62■■□□□ 1.85
SEC22C-213ENST00000456222 JAG1P78504 1218 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 TREML2Q5T2D2 321 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 NOL10Q9BSC4 688 aaKnown RBP26.62■■□□□ 1.85
SEC22C-213ENST00000456222 ANTXR1Q9H6X2 564 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 DNAJC18Q9H819 358 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 FLT1P17948 1338 aa26.62■■□□□ 1.85
SEC22C-213ENST00000456222 DOCK3Q8IZD9 2030 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 FMNL1O95466 1100 aaPredicted RBP26.61■■□□□ 1.85
SEC22C-213ENST00000456222 BAG3O95817 575 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 GNRH1P01148 92 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 CAP2P40123 477 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 SHROOM1Q2M3G4 852 aaPredicted RBP26.61■■□□□ 1.85
SEC22C-213ENST00000456222 NBPF11Q86T75 865 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 IL1RAPL2Q9NP60 686 aa26.61■■□□□ 1.85
SEC22C-213ENST00000456222 SLC34A2O95436 690 aa26.6■■□□□ 1.85
SEC22C-213ENST00000456222 SPP2Q13103 211 aa26.6■■□□□ 1.85
SEC22C-213ENST00000456222 AACSQ86V21 672 aa26.6■■□□□ 1.85
SEC22C-213ENST00000456222 SIRT2Q8IXJ6 389 aa26.6■■□□□ 1.85
SEC22C-213ENST00000456222 IDH1O75874 414 aaKnown RBP26.59■■□□□ 1.85
SEC22C-213ENST00000456222 CYP7A1P22680 504 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 PRMT2P55345 433 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 TMEM106CQ9BVX2 250 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 PI4KBQ9UBF8 816 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 SAP30BPQ9UHR5 308 aaKnown RBP26.59■■□□□ 1.85
SEC22C-213ENST00000456222 PALD1Q9ULE6 856 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 AGTPBP1Q9UPW5 1226 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 COG6Q9Y2V7 657 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 SLC45A1Q9Y2W3 748 aa26.59■■□□□ 1.85
SEC22C-213ENST00000456222 PLCG2P16885 1265 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 MTFR1Q15390 333 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 MIGA1Q8NAN2 632 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 HERC5Q9UII4 1024 aaKnown RBP26.58■■□□□ 1.85
SEC22C-213ENST00000456222 GABRQQ9UN88 632 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 MYH1P12882 1939 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 MYPNQ86TC9 1320 aa26.58■■□□□ 1.85
SEC22C-213ENST00000456222 PRKCZQ05513 592 aa26.57■■□□□ 1.84
SEC22C-213ENST00000456222 SLC4A8Q2Y0W8 1093 aa26.57■■□□□ 1.84
SEC22C-213ENST00000456222 ZNF280CQ8ND82 737 aa26.57■■□□□ 1.84
SEC22C-213ENST00000456222 HMGCS2P54868 508 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 METTL16Q86W50 562 aaKnown RBP26.56■■□□□ 1.84
SEC22C-213ENST00000456222 ERC1Q8IUD2 1116 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 MAGEB6Q8N7X4 407 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 RHPN1Q8TCX5 695 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 DHX36Q9H2U1 1008 aaKnown RBP26.56■■□□□ 1.84
SEC22C-213ENST00000456222 ZBTB40Q9NUA8 1239 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 CEP290O15078 2479 aa26.56■■□□□ 1.84
SEC22C-213ENST00000456222 APBB1O00213 710 aa26.55■■□□□ 1.84
SEC22C-213ENST00000456222 FCGRTP55899 365 aa26.55■■□□□ 1.84
SEC22C-213ENST00000456222 RAET1EQ8TD07 263 aa26.55■■□□□ 1.84
SEC22C-213ENST00000456222 USP17L5A8MUK1 530 aa26.54■■□□□ 1.84
SEC22C-213ENST00000456222 PROCA1Q8NCQ7 364 aaPredicted RBP26.54■■□□□ 1.84
SEC22C-213ENST00000456222 SMCR8Q8TEV9 937 aaPredicted RBP26.54■■□□□ 1.84
SEC22C-213ENST00000456222 HOXD10P28358 340 aa26.53■■□□□ 1.84
SEC22C-213ENST00000456222 GRK4P32298 578 aa26.53■■□□□ 1.84
SEC22C-213ENST00000456222 ANKRD13CQ8N6S4 541 aa26.53■■□□□ 1.84
SEC22C-213ENST00000456222 IGSF3O75054 1194 aa26.52■■□□□ 1.84
SEC22C-213ENST00000456222 GDF11O95390 407 aa26.52■■□□□ 1.84
SEC22C-213ENST00000456222 MS4A1P11836 297 aa26.52■■□□□ 1.84
SEC22C-213ENST00000456222 SHISA4Q96DD7 197 aa26.52■■□□□ 1.84
SEC22C-213ENST00000456222 RCAN3Q9UKA8 241 aa26.52■■□□□ 1.84
SEC22C-213ENST00000456222 MTMR2Q13614 643 aa26.51■■□□□ 1.83
SEC22C-213ENST00000456222 SH3D19Q5HYK7 790 aa26.51■■□□□ 1.83
SEC22C-213ENST00000456222 C20orf194Q5TEA3 1177 aa26.51■■□□□ 1.83
SEC22C-213ENST00000456222 FOXP4Q8IVH2 680 aaPredicted RBP26.51■■□□□ 1.83
SEC22C-213ENST00000456222 CRACR2BQ8N4Y2 399 aaPredicted RBP26.51■■□□□ 1.83
SEC22C-213ENST00000456222 DDX19BQ9UMR2 479 aa26.51■■□□□ 1.83
SEC22C-213ENST00000456222 HSP90AB4PQ58FF6 505 aa26.5■■□□□ 1.83
SEC22C-213ENST00000456222 RPAP2Q8IXW5 612 aaPredicted RBP26.5■■□□□ 1.83
SEC22C-213ENST00000456222 WDR18Q9BV38 432 aa26.5■■□□□ 1.83
SEC22C-213ENST00000456222 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
SEC22C-213ENST00000456222 DDX60LQ5H9U9 1706 aaKnown RBP26.5■■□□□ 1.83
SEC22C-213ENST00000456222 ASNSP08243 561 aa26.49■■□□□ 1.83
SEC22C-213ENST00000456222 FLT3LGP49771 235 aa26.49■■□□□ 1.83
SEC22C-213ENST00000456222 TBC1D2Q9BYX2 928 aa26.49■■□□□ 1.83
SEC22C-213ENST00000456222 ASCC2Q9H1I8 757 aaPredicted RBP26.49■■□□□ 1.83
SEC22C-213ENST00000456222 ZBTB21Q9ULJ3 1066 aa26.49■■□□□ 1.83
SEC22C-213ENST00000456222 ELNP15502 786 aa26.48■■□□□ 1.83
SEC22C-213ENST00000456222 MAP3K12Q12852 859 aa26.48■■□□□ 1.83
SEC22C-213ENST00000456222 KIF1BPQ96EK5 621 aa26.48■■□□□ 1.83
SEC22C-213ENST00000456222 EDC3Q96F86 508 aaKnown RBP26.48■■□□□ 1.83
SEC22C-213ENST00000456222 RIOK1Q9BRS2 568 aaKnown RBP26.48■■□□□ 1.83
SEC22C-213ENST00000456222 AS3MTQ9HBK9 375 aa26.48■■□□□ 1.83
SEC22C-213ENST00000456222 PNMA3Q9UL41 463 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms