RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 PTGS1P23219 599 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 ARID4AP29374 1257 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 VEGFBP49765 207 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 RCAN1P53805 252 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 SF3A1Q15459 793 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 SPC24Q8NBT2 197 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 ANGEL1Q9UNK9 670 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 RIPOR2Q9Y4F9 1068 aa12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-206ENST00000454704 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 FAM237AA0A1B0GTK4 181 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 SPTLC2O15270 562 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 PDE8AO60658 829 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 CMA1P23946 247 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 GPTP24298 496 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 CTSWP56202 376 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 MAP1SQ66K74 1059 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 TMED8Q6PL24 325 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 WASF1Q92558 559 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 ZNF594Q96JF6 807 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 PUS3Q9BZE2 481 aaKnown RBP12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
GTF3C2-206ENST00000454704 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 IKBKBO14920 756 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 CCP110O43303 1012 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 GNAT2P19087 354 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 ZAP70P43403 619 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 LDHAL6AQ6ZMR3 332 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 PNMA8AQ86V59 439 aaPredicted RBP12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 SGMS1Q86VZ5 419 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 GPC2Q8N158 579 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 PDCL2Q8N4E4 241 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 AIDAQ96BJ3 306 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 PSMD1Q99460 953 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 GOLPH3LQ9H4A5 285 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
GTF3C2-206ENST00000454704 FOXP2O15409 715 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 PDE8BO95263 885 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 LIFRP42702 1097 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 NLRP12P59046 1061 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 ANO1Q5XXA6 986 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 VGLL2Q8N8G2 317 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 NCOA5Q9HCD5 579 aaKnown RBP12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 NAP1L2Q9ULW6 460 aaPredicted RBP12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 GJA3Q9Y6H8 435 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 MYH6P13533 1939 aa12.22□□□□□ -0.45
GTF3C2-206ENST00000454704 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 ITGA6P23229 1130 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 ADORA1P30542 326 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 ANTXR2P58335 489 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 TRIM29Q14134 588 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 SLC39A14Q15043 492 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 PUM3Q15397 648 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 C11orf57Q6ZUT1 292 aaPredicted RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 SMAP1Q8IYB5 467 aaPredicted RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 ANKRD7Q92527 254 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 LPIN2Q92539 896 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 CNNM1Q9NRU3 951 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 A0A1B0GUL6 1792 aa12.21□□□□□ -0.45
GTF3C2-206ENST00000454704 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 CBFA2T2O43439 604 aa12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 CHGBP05060 677 aa12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 MCAMP43121 646 aa12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 METAP2P50579 478 aaKnown RBP eCLIP12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 EIF6P56537 245 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-206ENST00000454704 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms