RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 USP40Q9NVE5 1235 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PALLDQ8WX93 1383 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 NONOQ15233 471 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CCDC174Q6PII3 467 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 BICDL2A1A5D9 508 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 HS2ST1Q7LGA3 356 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PAXBP1Q9Y5B6 917 aa11.36□□□□□ -0.59
CSGALNACT1-203ENST00000454498 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ADD2P35612 726 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 TXKP42681 527 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 BAG6P46379 1132 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PAF1Q8N7H5 531 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SETQ01105 290 aaPredicted RBP11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CUL4AQ13619 759 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 LEKR1Q6ZMV7 388 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 BICD1Q96G01 975 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SERPINB2P05120 415 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 DESP17661 470 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SCRN1Q12765 414 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CCNT1O60563 726 aaKnown RBP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 NF2P35240 595 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 XDHP47989 1333 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 BTBD18B2RXH4 712 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ADALQ6DHV7 355 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 NAP1L4Q99733 375 aaKnown RBP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 GLT8D2Q9H1C3 349 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 OVOS2A0A0J9YW53 1432 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SEMA3EO15041 775 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 FAM13AO94988 1023 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 KRT13P13646 458 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SCNN1DP51172 638 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 UBXN1Q04323 297 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 OVOS2Q6IE36 1432 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
CSGALNACT1-203ENST00000454498 NECTIN1Q15223 517 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 MAP9Q49MG5 647 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 EHBP1Q8NDI1 1231 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 FERMT2Q96AC1 680 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.59
CSGALNACT1-203ENST00000454498 MACROD2A1Z1Q3 448 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 M0R2C6 588 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 CCDC175P0C221 793 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 NEFHP12036 1026 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 BTDP43251 543 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 TAF3Q5VWG9 929 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 MLKLQ8NB16 471 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 SNAP23O00161 211 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 ADCY7P51828 1080 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 STAMQ92783 540 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 CPS1P31327 1500 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 PDE4DQ08499 809 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 SEPT12Q8IYM1 358 aa11.33□□□□□ -0.6
CSGALNACT1-203ENST00000454498 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms